CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_THEPX (50S ribosomal protein L14 OS=Thermoanaerobacter sp. (strain X514) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I ++G R + VGD+++A+VK P + +V+ AVIVR +K RKDG ++ F+DNA VI+ + +G+ I GP+ +E Sbjct: 11 ADNTGAKEIMCIRLEGGSNR----KFSNVGDVIVASVKSATPGGVVKKGEVVKAVIVRTKKGIARKDGTYIRFDDNAAVIIRDDKQPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_THEP3 (50S ribosomal protein L14 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I ++G R + VGD+++A+VK P + +V+ AVIVR +K RKDG ++ F+DNA VI+ + +G+ I GP+ +E Sbjct: 11 ADNTGAKEIMCIRLEGGSNR----KFSNVGDVIVASVKSATPGGVVKKGEVVKAVIVRTKKGIARKDGTYIRFDDNAAVIIRDDKQPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PROMP (50S ribosomal protein L14 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK L I V G R A VGD+V+A+VK P++ K V+ AVIVR R RR G + F+DNA V++N KG+ + GP+ +E D Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVVVASVKDALPNMGVKKSDVVKAVIVRTRHTLRRNTGNSIRFDDNAAVLINEDKNPKGTRVFGPVARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PROM5 (50S ribosomal protein L14 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK L I V G R A VGD+V+A+VK P++ K V+ AVIVR R RR G + F+DNA V++N KG+ + GP+ +E D Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVVVASVKDALPNMGVKKSDVVKAVIVRTRHTLRRNTGNSIRFDDNAAVLINEDKNPKGTRVFGPVARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HELPY (50S ribosomal protein L14 OS=Helicobacter pylori GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VG +++A+VKK P+ R +V+ AV+VR +K +RK+G + F+DNA VI++ K + G+ I GP+ +E Sbjct: 8 LNVADNSGAKEIMCIKVLG--GSHKRYAS--VGSVIVASVKKAIPNGKVKRGQVVKAVVVRTKKEIQRKNGSLVRFDDNAAVILDAKKDPVGTRIFGPVSRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HELPS (50S ribosomal protein L14 OS=Helicobacter pylori (strain Shi470) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VG +++A+VKK P+ R +V+ AV+VR +K +RK+G + F+DNA VI++ K + G+ I GP+ +E Sbjct: 8 LNVADNSGAKEIMCIKVLG--GSHKRYAS--VGSVIVASVKKAIPNGKVKRGQVVKAVVVRTKKEIQRKNGSLVRFDDNAAVILDAKKDPVGTRIFGPVSRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HELPH (50S ribosomal protein L14 OS=Helicobacter pylori (strain HPAG1) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VG +++A+VKK P+ R +V+ AV+VR +K +RK+G + F+DNA VI++ K + G+ I GP+ +E Sbjct: 8 LNVADNSGAKEIMCIKVLG--GSHKRYAS--VGSVIVASVKKAIPNGKVKRGQVVKAVVVRTKKEIQRKNGSLVRFDDNAAVILDAKKDPVGTRIFGPVSRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HELPG (50S ribosomal protein L14 OS=Helicobacter pylori (strain G27) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VG +++A+VKK P+ R +V+ AV+VR +K +RK+G + F+DNA VI++ K + G+ I GP+ +E Sbjct: 8 LNVADNSGAKEIMCIKVLG--GSHKRYAS--VGSVIVASVKKAIPNGKVKRGQVVKAVVVRTKKEIQRKNGSLVRFDDNAAVILDAKKDPVGTRIFGPVSRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HELP2 (50S ribosomal protein L14 OS=Helicobacter pylori (strain P12) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VG +++A+VKK P+ R +V+ AV+VR +K +RK+G + F+DNA VI++ K + G+ I GP+ +E Sbjct: 8 LNVADNSGAKEIMCIKVLG--GSHKRYAS--VGSVIVASVKKAIPNGKVKRGQVVKAVVVRTKKEIQRKNGSLVRFDDNAAVILDAKKDPVGTRIFGPVSRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HELAH (50S ribosomal protein L14 OS=Helicobacter acinonychis (strain Sheeba) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VG +++A+VKK P+ R +V+ AV+VR +K +RK+G + F+DNA VI++ K + G+ I GP+ +E Sbjct: 8 LNVADNSGAKEIMCIKVLG--GSHKRYAS--VGSVIVASVKKAIPNGKVKRGQVVKAVVVRTKKEIQRKNGSLVRFDDNAAVILDAKKDPVGTRIFGPVSRE 105 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |