CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METS3 (50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.274e-30 Identity = 62/115 (53.91%), Postives = 85/115 (73.91%), Query Frame = -3 Query: 227 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 571 +S LP+ AT+ C DNTGA+ + IISVKG KG RL A VGD+V+A+VKKG D+R++V+ AV++RQ+K + R DG+ + FEDNA VI+ P+G +KGS + GP+ KE AD WP Sbjct: 8 VSKALPIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRREVVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKEAADRWP 122
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METJA (50S ribosomal protein L14P OS=Methanocaldococcus jannaschii GN=rpl14p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.274e-30 Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = -3 Query: 227 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 559 LPV A CADNTGAK + II+V+ KG RLP+A VGDMV+ TVKKG P++RK+V+PAV++RQRK RR DG + F DNA VIV P G KGS I GP+ KE A+ WP Sbjct: 12 LPVGARCICADNTGAKEVEIIAVRNYKGVARRLPTARVGDMVIVTVKKGTPEMRKQVLPAVVIRQRKEIRRPDGTRVKFADNAVVIVTPDGNPKGSDIKGPVAKEAAERWP 122
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_KORCO (50S ribosomal protein L14P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.838e-30 Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = -3 Query: 227 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 586 G K +++ GLPV A + CADNTGAK L II V G KGR +R+P+A VGDMV VK+GK DL K A++VRQR P+RRK+G ++ FEDNA V+VN G +GS GPI KE + WP Sbjct: 12 GVKPKITHGLPVRARLKCADNTGAKLLMIIGVHGYKGRKDRVPTASVGDMVTVVVKRGKYDLMHKPFKAIVVRQRMPYRRKNGQWVVFEDNAAVLVNDDGTPRGSEFRGPIAKEAIERWP 131
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METVS (50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.707e-30 Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = -3 Query: 227 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 559 LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWP 122
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METVA (50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.707e-30 Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = -3 Query: 227 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 559 LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWP 122
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.323e-30 Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = -3 Query: 227 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 559 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE A+ WP Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWP 122
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_META3 (50S ribosomal protein L14P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.323e-30 Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = -3 Query: 230 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLW 559 LP A + CADNTGAK L II+VKG KG RLP+ VG +V +VKKG P++RK+V+PA+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE A+ W Sbjct: 12 LPNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAERW 121
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.258e-30 Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = -3 Query: 227 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 559 LP A + CADNTGAK L II+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP Sbjct: 12 LPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWP 122
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.078e-29 Identity = 61/111 (54.95%), Postives = 80/111 (72.07%), Query Frame = -3 Query: 227 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 559 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWP 122
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METM5 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.409e-29 Identity = 61/111 (54.95%), Postives = 80/111 (72.07%), Query Frame = -3 Query: 227 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWP 559 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWP 122 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |