CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_GEOSW (50S ribosomal protein L14 OS=Geobacillus sp. (strain WCH70) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 39/102 (38.24%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + +I V G GR A +GD+V+ATVK+ P + +V+ AV+VR ++ RR DG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKEATPGGVVKKGQVVKAVVVRTKRGVRRSDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_GEOSL (50S ribosomal protein L14 OS=Geobacter sulfurreducens GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + + ++ ADN+GAK L+ I V G R A VGD+V+ +V++ P+ + K V+ VIVR K R DG ++ F+DN+GV++N + E G+ I GP+ +E Sbjct: 2 IQMQTVLDVADNSGAKKLFCIKVLGGSKR----KYAGVGDIVVCSVREAVPNAKVKKGDVVKVVIVRTAKEIGRPDGSYIRFDDNSGVVINNQREPVGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CAMJR (50S ribosomal protein L14 OS=Campylobacter jejuni (strain RM1221) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK L I V G G R A VGD+++A+VKK P+ + K V+ AVIVR +K R +G + F++NA VI++ K E G+ I GP+G+E Sbjct: 11 ADNSGAKELMCIKVLG--GSKRRY--ATVGDVIVASVKKALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CAMJJ (50S ribosomal protein L14 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK L I V G G R A VGD+++A+VKK P+ + K V+ AVIVR +K R +G + F++NA VI++ K E G+ I GP+G+E Sbjct: 11 ADNSGAKELMCIKVLG--GSKRRY--ATVGDVIVASVKKALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CAMJE (50S ribosomal protein L14 OS=Campylobacter jejuni GN=rplN PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK L I V G G R A VGD+++A+VKK P+ + K V+ AVIVR +K R +G + F++NA VI++ K E G+ I GP+G+E Sbjct: 11 ADNSGAKELMCIKVLG--GSKRRY--ATVGDVIVASVKKALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CAMJD (50S ribosomal protein L14 OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK L I V G G R A VGD+++A+VKK P+ + K V+ AVIVR +K R +G + F++NA VI++ K E G+ I GP+G+E Sbjct: 11 ADNSGAKELMCIKVLG--GSKRRY--ATVGDVIVASVKKALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CAMJ8 (50S ribosomal protein L14 OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK L I V G G R A VGD+++A+VKK P+ + K V+ AVIVR +K R +G + F++NA VI++ K E G+ I GP+G+E Sbjct: 11 ADNSGAKELMCIKVLG--GSKRRY--ATVGDVIVASVKKALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_ANAVT (50S ribosomal protein L14 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L I V G +GD ++A VK P++ K V+ AVIVR R RR G+ + F+DNA VI+N G +G+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCIRVLGA----GNSRYGFIGDKIIAVVKDATPNMAVKKSDVVEAVIVRTRHHIRRDSGMTIRFDDNAAVIINKDGNPRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_ANASP (50S ribosomal protein L14 OS=Anabaena sp. (strain PCC 7120) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L I V G +GD ++A VK P++ K V+ AVIVR R RR G+ + F+DNA VI+N G +G+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCIRVLGA----GNSRYGFIGDKIIAVVKDATPNMAVKKSDVVEAVIVRTRHHIRRDSGMTIRFDDNAAVIINKDGNPRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PSEAK (50S ribosomal protein L14, chloroplastic OS=Pseudendoclonium akinetum GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV---MPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GAK L I V G + SA +GD+++A VK+ P++ K + AV+VR + +R++G F+ F+DNA V++N +G+ + GP+ +E D Sbjct: 8 LNVADNSGAKKLMCIRVLGGSYK----QSANIGDIIIAVVKQATPNMPLKKSDKVRAVVVRTAQGVQRENGTFIRFDDNAAVVINKDDNPRGTRVFGPVARELRD 108 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |