CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_DICTD (50S ribosomal protein L14 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + + G K A VGD+++A+VK+ P K V+ AV++R ++ +RKDG + F+DNA VI++ +G +G+ + GP+ +E D Sbjct: 11 ADNTGAKEIMCFRILGKK------KVAQVGDIIVASVKEAVPRSNIKKGDVVYAVVIRTKRTIKRKDGSCVRFDDNAAVIIDKEGNPRGTRVFGPVARELRD 106
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CYTH3 (50S ribosomal protein L14 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 ++ ADN+GAK + +I V G G+ A +GD V+ TVK K V AV+VR +K +R DG ++ F DNA V++N E +G+ I GP+ +E D Sbjct: 8 LSVADNSGAKEVLVIRVLGGTGKRY----ASIGDKVVVTVKSAISSSNMKKGTVSKAVVVRTKKEVKRADGSYIRFSDNAAVLLNNNDEPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLTR (50S ribosomal protein L14 OS=Chlamydia trachomatis GN=rplN PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R RKDG + F+ N+ VI++ KG KG+ I GPI +E D Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDVIVCSVRDVEPDSSVKKGDVVKAVIVRTRNDIHRKDGSTLRFDTNSCVIIDDKGNPKGTRIFGPIAREIRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLTA (50S ribosomal protein L14 OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R RKDG + F+ N+ VI++ KG KG+ I GPI +E D Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDVIVCSVRDVEPDSSVKKGDVVKAVIVRTRNDIHRKDGSTLRFDTNSCVIIDDKGNPKGTRIFGPIAREIRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CAMHC (50S ribosomal protein L14 OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK L I + G G R A VGD+++ +VKK P+ R +V+ AV+VR +K R +G + F++NA V+++ K E+ G+ I GP+G+E Sbjct: 11 ADNSGAKELMCIKILG--GSKRRY--ATVGDIIVCSVKKALPNGKIKRGQVVKAVVVRTKKELHRGNGSLIRFDENAAVVLDSKKELIGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_BACV8 (50S ribosomal protein L14 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + V + + DN+GAK I V G G R S VGD+++ ++K P D++K V A+IVR +K RR DG ++ F+DNA V++N GE++GS I GP+ +E Sbjct: 2 IQVESRLTVCDNSGAKEALCIRVLG--GTKRRYAS--VGDVIVVSIKSVIPSSDVKKGAVSKALIVRTKKEIRRADGSYIRFDDNACVLLNNAGEIRGSRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_POPTR (50S ribosomal protein L14, chloroplastic OS=Populus trichocarpa GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGTSNRRY----AHIGDIIIAVIKEAVPNSPLERSEVIRAVIVRTSKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_POPAL (50S ribosomal protein L14, chloroplastic OS=Populus alba GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGTSNRRY----AHIGDVIIAVIKEAVPNSPLERSEVIRAVIVRTSKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_ODOSI (50S ribosomal protein L14, chloroplastic OS=Odontella sinensis GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 37/102 (36.27%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGA+ + I V G + A +GD ++ VK+ P++ R ++ A++VR K RR DG+++ F+DNA VIVN +G+ + GP+ +E D Sbjct: 11 ADNTGARKIMCIRVLGGNRKY-----AKIGDTIIGVVKEAIPNMPIKRSDIVRAIVVRTSKTIRRPDGMYIRFDDNAAVIVNLDNNPRGTRVFGPVAREIRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_IPOPU (50S ribosomal protein L14, chloroplastic OS=Ipomoea purpurea GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 37/102 (36.27%), Postives = 63/102 (61.76%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDIIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDKEGNPKGTRIFGAIARE 105 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |