CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PINTH (50S ribosomal protein L14, chloroplastic OS=Pinus thunbergii GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 34/106 (32.08%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ + I V G R A +GD+++A +K+ P++ + +V+ AV++R K + R +G+ + +DNA V+++ +G KG+ + GP+ +E L Sbjct: 8 LNIADNSGARKIMCIRVLGASNR----KCAHIGDVIIAIIKEAVPNMPLEKSEVVRAVVIRTCKEFERDNGMMIRSDDNAAVVIDQEGNPKGTRVFGPVAQELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PINKO (50S ribosomal protein L14, chloroplastic OS=Pinus koraiensis GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 34/106 (32.08%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ + I V G R A +GD+++A +K+ P++ + +V+ AV++R K + R +G+ + +DNA V+++ +G KG+ + GP+ +E L Sbjct: 8 LNIADNSGARKIMCIRVLGASNR----KCAHIGDVIIAIIKEAVPNMPLEKSEVVRAVVIRTCKEFERDNGMMIRSDDNAAVVIDQEGNPKGTRVFGPVAQELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_MANES (50S ribosomal protein L14, chloroplastic OS=Manihot esculenta GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGTSNRRY----AHIGDVIVAVIKEAAPNSPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_LIRTU (50S ribosomal protein L14, chloroplastic OS=Liriodendron tulipifera GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G A +GD+++A +K+ P++ R +V+ AVIVR K RR +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNHRY----AHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_BUXMI (50S ribosomal protein L14, chloroplastic OS=Buxus microphylla GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K R +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARKLMCIRIVGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELNRGNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_ANEMR (50S ribosomal protein L14, plastid OS=Aneura mirabilis GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = -3 Query: 245 NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 538 N ADN+GA+ L I V G R A +GD+++A VK+ P++ + +++ AVI R RK R DG + F+DNA V +N + +G+ + GPI +E Sbjct: 9 NVADNSGAQKLMCIRVTGTNDR----EYAGIGDVIVAVVKEAVPNMPTKKSEIVRAVIARTRKEIGRTDGSVIKFDDNAAVTINRENNPRGTRVFGPIARE 105 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |