CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PYRFU (50S ribosomal protein L14P OS=Pyrococcus furiosus GN=rpl14p PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.138e-29 Identity = 68/132 (51.52%), Postives = 91/132 (68.94%), Query Frame = -3 Query: 224 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 616 M+K+G G + G + R + LPV A + ADN+GAK + II V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W R Sbjct: 1 MAKKGAGATRGVSAVRPTRALPVGAYLTVADNSGAKVIQIIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVR 132
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PYRKO (50S ribosomal protein L14P OS=Pyrococcus kodakaraensis GN=rpl14p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.098e-29 Identity = 67/132 (50.76%), Postives = 91/132 (68.94%), Query Frame = -3 Query: 224 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 616 M+K+G G + G + R + LP+ A + ADN+GAK + II V G KG RL +A VGDMV+ATVKKG+PD+R +V+ AV+VRQRK +RR DG+ + FEDNA IV P+G +G+ I G I +E A+ W R Sbjct: 1 MAKKGAGATRGISPVRPTRALPIGAYLKVADNSGAKVIQIIGVVGYKGTRRRLAAAGVGDMVVATVKKGRPDMRHQVVRAVVVRQRKEYRRLDGMRVKFEDNAAAIVTPEGVPRGTEIRGAIAREAAERWVR 132
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CENSY (50S ribosomal protein L14P OS=Cenarchaeum symbiosum GN=rpl14p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.352e-29 Identity = 69/131 (52.67%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 224 RGRGGSAG-NKFR--MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 607 R RG + G +FR ++ LPV A V CADN+GAK L II V+ K R++RLP+A VGD V VKKG +LRK+V AVI+RQ+ P RR +GV + FEDNA V+ P+GEMKG+ I GP+ E ++ WPR Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKWPR 135
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PYRHO (50S ribosomal protein L14P OS=Pyrococcus horikoshii GN=rpl14p PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 9.130e-29 Identity = 65/132 (49.24%), Postives = 91/132 (68.94%), Query Frame = -3 Query: 224 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 616 M+K+G G + G + R + +P+ A + ADN+GAK + +I V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W R Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAEKWVR 132
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PYRAB (50S ribosomal protein L14P OS=Pyrococcus abyssi GN=rpl14p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.130e-29 Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 224 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 616 M+K+G G + G R + +PV A + ADN+GAK + +I V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W R Sbjct: 1 MAKKGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVR 132
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SULTO (50S ribosomal protein L14P OS=Sulfolobus tokodaii GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.034e-28 Identity = 63/121 (52.07%), Postives = 83/121 (68.60%), Query Frame = -3 Query: 224 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 586 G++ ++ GL TV ADN+GAK II + G KG L R+P A + D+VM +V+KG P++RK+ AVIVRQR P+RR DG ++ FEDNA VIVNP G KG+ I GPI KE A+ WP+ Sbjct: 12 GSRKGLTPGLQHYTTVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTPEVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERWPK 132
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_IGNH4 (50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.034e-28 Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = -3 Query: 224 SAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 592 ++ NK R + GL V + V DN+GAK II V G GRL R+P A VGDMV+ TVKKG P++R +V+ A++VRQRKP+RR DG ++ FEDNA VIV+ G +GS I GP+ +E + WPR Sbjct: 4 ASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVERWPR 128
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.729e-28 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = -3 Query: 224 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 541 VN +DN+GAK IISV G +G L R+P A VGD+VM +V+KG PD+RK+ AV++RQR P+RR DG ++ F+DNA VIVNP G KG+ I GP+ +E A+ WP+ Sbjct: 24 VNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPK 129
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_ARCFU (50S ribosomal protein L14P OS=Archaeoglobus fulgidus GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.937e-27 Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = -3 Query: 236 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 559 LP A + CADNTGA+ L II+VKG KG R P+A VGD+V+ TVKKG P++RK+V AVIVRQRK +RR DG + FEDNA VI N +GE +GS I G + +E A+ Sbjct: 12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYAVIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAE 119
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_THEPD (50S ribosomal protein L14P OS=Thermofilum pendens (strain Hrk 5) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.836e-27 Identity = 61/133 (45.86%), Postives = 91/133 (68.42%), Query Frame = -3 Query: 224 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 616 M+KRG + G +R+ L G+ + + V ADN+GA +I V K R+P A VGD+V+ +++ GKP+LRK+VM A+++RQR+P+RR DG ++ FEDNA VI+ P+GE KG+ I GP+ KE A+ WP+ Sbjct: 1 MAKRGPK-TVGVSYRLGLTPGVFMESLVKVADNSGATLAKVIGVPHYKAVWRRIPGAAVGDIVIVSIRAGKPELRKQVMRAIVIRQRRPYRRPDGSWIAFEDNAVVIITPEGEPKGTEIRGPLAKEAAERWPK 132 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |