CB304947

Overview
NameCB304947
Unique NameCB304947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_RHIME (Phosphoadenosine phosphosulfate reductase OS=Rhizobium meliloti GN=cysH PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.030e-25
Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = -2
Query:   32 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQ 514
            V +L TGRL  ET    D+ E+ + I I+  +P+  ++ A V   G+  FYE  +    CC VRK++PL RAL G   WITG R+ QS G R+  P  + D     +E G   L+K NP+A+     I   +    +P+N LH++GY SIGCEPCTR + PG+
Sbjct:   76 VATLKTGRLFNETVALIDQTEETYDILIKRYYPEKADIDAYVAQYGMNGFYESVEARHACCGVRKLKPLARALDGASYWITGLRRGQS-GNRATTPFAEAD-----VERG---LIKINPLADWGIETIQAHVAAEGIPVNPLHSRGYPSIGCEPCTRAIKPGE 229          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_GEOSW (Phosphoadenosine phosphosulfate reductase OS=Geobacillus sp. (strain WCH70) GN=cysH PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.025e-22
Identity = 64/175 (36.57%), Postives = 95/175 (54.29%), Query Frame = -2
Query:   41 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEV-EKHFGIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVL 559
            + LI+          +  LDTG    ETY+  ++V EK+  +RI    P  ++E QA      L   ++    +CC +RKV PLR AL G+ AWI+G R++QSP TRS +  + +D  F+ ++  +  L+ W         D+WN++    +P N LH +GY SIGCEPCT P L
Sbjct:   50 IVLIDLISQVKPDAEIVFLDTGLHFRETYKTIEKVKEKYPSLRIVMKKPSLSLEEQAQQLGDEL---WKHNPNKCCELRKVIPLREALTGITAWISGLRREQSP-TRSHVEYINKDDKFKSIK--ICPLIHWT------WKDVWNYVYKRRLPYNVLHDRGYPSIGCEPCTSPAL 212          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_STAHJ (Phosphoadenosine phosphosulfate reductase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=cysH PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.011e-21
Identity = 61/178 (34.27%), Postives = 98/178 (55.06%), Query Frame = -2
Query:   32 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQ 559
            + LI+  +      ++  LDT     ETY   D V++HF  +RIE   PD  +E QA   +  L   +++   +CC +RK++PL   L G  AW++G R+DQSP TR+    + +D  F+ ++  V  L+ W        +++W++++  D+P N+LH Q Y SIGC PCT PV   +
Sbjct:   55 MVLIDLIYQIKPDAQIVFLDTDLHFQETYDLIDRVKEHFPKLRIEMKKPDLTLEEQADKYNPAL---WKNNPNQCCYIRKIKPLEEVLGGAVAWVSGLRRDQSP-TRANTNFINKDERFKSVK--VCPLIYWTE------DEVWDYIKKHDLPYNALHDQHYPSIGCIPCTAPVFDSE 220          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH2_BACSU (Probable phosphoadenosine phosphosulfate reductase OS=Bacillus subtilis GN=yitB PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.702e-20
Identity = 57/172 (33.14%), Postives = 90/172 (52.33%), Query Frame = -2
Query:   47 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRP 559
            + L++      +   +  LDTG    ETY   + V++ + G  I+ + P+    +   +  G    ++     CC++RK+ PL++ L G+ AWI+G R+DQSP TR  I  V  D  FE        L+K  P+ +   +D+W ++R  ++P N LH Q Y SIGCE CT P
Sbjct:   51 MVLLDLISKINKNAHIIFLDTGLHFQETYELIETVKERYPGFAIQMLEPELSLTEQGTKYGG--ELWKHNPNLCCQLRKIEPLKKHLSGMTAWISGLRRDQSP-TRKHIQYVNLDQKFE--------LIKICPLIHWTWDDVWTYIRLHNLPYNKLHDQHYPSIGCEMCTLP 211          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_SALRD (Phosphoadenosine phosphosulfate reductase OS=Salinibacter ruber (strain DSM 13855) GN=cysH PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.468e-20
Identity = 59/158 (37.34%), Postives = 87/158 (55.06%), Query Frame = -2
Query:   44 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPV 514
            VF LDT  L PETY   D++++   + +  +    +++ QA    + L++        CC +RKV+PLR  L   RAWITG R+DQS   R++  ++     +EG  G    + K NP+AN    ++W +L   D+P N  H QGY S+GC PCT PV
Sbjct:   70 VFYLDTDLLFPETYELCDDLDERLDVDVTRVHGGLSLDEQAEQEGEELWN---RNPNRCCFLRKVKPLRNFLDDRRAWITGVRRDQSE-RRADTDILS----WEGQYG----VFKINPLANWTQKEVWKYLFEHDLPYNPKHDQGYPSLGCVPCTEPV 215          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_GLOVI (Phosphoadenosine phosphosulfate reductase OS=Gloeobacter violaceus GN=cysH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.882e-19
Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = -2
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPDAVEVQALVRSKGLFS--FYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEP--CTRPVLPG 517
            + F L+TG   PET    D V   F  +++E + P    + ++ +   ++    ++     CC +RKV PL RAL   +AWI G R++QSP TR +I VVQ D            +VK+NP+A      +W ++   D+P N LH +G+ SIGC P  CT PV  G
Sbjct:   69 QAFFLETGFHFPETLALKDRVLARFPQLQLEVVGP----LMSVAQQNAIYGERLHDRNPDHCCAIRKVEPLNRALAPYKAWIAGMRREQSP-TRGQIGVVQWD--------SRRGMVKFNPLATWTHKQVWAYIVERDLPYNPLHDEGFPSIGCSPLNCTAPVADG 221          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_GEOKA (Phosphoadenosine phosphosulfate reductase OS=Geobacillus kaustophilus GN=cysH PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.192e-19
Identity = 61/174 (35.06%), Postives = 86/174 (49.43%), Query Frame = -2
Query:   47 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEV-EKHFGIRIEYMFPDAVEVQALVRSKGLFS--FYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRP 559
            + LI+          +  LDTG   PETY    +V EK+  +RI    P       L   K  F    ++    +CC +RKV PLR  L G+ AWI+G R++QSP TR  +  + +D  F  ++  V  L+ W         D+WN++    +P N LH +GY SIGC PCT P
Sbjct:   50 IVLIDLISQVKPDAEIVFLDTGLHFPETYDTIAKVKEKYPSLRIVMKQPRLT----LEEQKAQFGDELWKRDPNKCCELRKVIPLREVLTGVTAWISGLRREQSP-TRRHVEYINKDDKFRSIK--VCPLIHWT------WKDVWNYVYKRHLPYNVLHDRGYPSIGCAPCTAP 210          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_RHOE4 (Phosphoadenosine phosphosulfate reductase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=cysH PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19
Identity = 59/161 (36.65%), Postives = 83/161 (51.55%), Query Frame = -2
Query:   35 VFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 514
            V  LDTG   PET    D VE+ +G+  I      +V  Q +   K LF+        CC +RKV PL++ L G  AW+TG R+ ++P TR+  P++  D  F         LVK NP+A     ++ N++ T  + +N L  +GY SIGC PCT    PG
Sbjct:   78 VLFLDTGYHFPETIGTRDAVEQVYGVNVINARALASVAEQDVAEGKDLFA---RDPNRCCALRKVAPLKQTLSGYSAWVTGIRRVEAP-TRANAPLISFDEAF--------GLVKINPIAPWSDEEMQNYIDTNSILVNPLVDEGYPSIGCAPCTSKPAPG 226          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_MYCTU (Probable phosphoadenosine phosphosulfate reductase OS=Mycobacterium tuberculosis GN=cysH PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.339e-19
Identity = 62/171 (36.26%), Postives = 87/171 (50.88%), Query Frame = -2
Query:   53 DVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCT 562
            D  L++ A        V  LDTG    ET    D +E  + +R+  + P+  V  Q  +  K LF+       ECCR+RKV PL + L+G  AW+TG R+  +P TR+  P+V  D  F+        LVK NP+A     D+  ++   DV +N L  +GY SIGC PCT
Sbjct:   69 DAVLVDLAAKVRPGVPVIFLDTGYHFVETIGTRDAIESVYDVRVLNVTPEHTVAEQDELLGKDLFA---RNPHECCRLRKVVPLGKTLRGYSAWVTGLRRVDAP-TRANAPLVSFDETFK--------LVKVNPLAAWTDQDVQEYIADNDVLVNPLVREGYPSIGCAPCT 227          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_MYCTA (Phosphoadenosine phosphosulfate reductase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=cysH PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.339e-19
Identity = 62/171 (36.26%), Postives = 87/171 (50.88%), Query Frame = -2
Query:   53 DVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCT 562
            D  L++ A        V  LDTG    ET    D +E  + +R+  + P+  V  Q  +  K LF+       ECCR+RKV PL + L+G  AW+TG R+  +P TR+  P+V  D  F+        LVK NP+A     D+  ++   DV +N L  +GY SIGC PCT
Sbjct:   69 DAVLVDLAAKVRPGVPVIFLDTGYHFVETIGTRDAIESVYDVRVLNVTPEHTVAEQDELLGKDLFA---RNPHECCRLRKVVPLGKTLRGYSAWVTGLRRVDAP-TRANAPLVSFDETFK--------LVKVNPLAAWTDQDVQEYIADNDVLVNPLVREGYPSIGCAPCT 227          
The following BLAST results are available for this feature:
BLAST of CB304947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CYSH_RHIME1.030e-2540.49Phosphoadenosine phosphosulfate reductase OS=Rhizo... [more]
CYSH_GEOSW9.025e-2236.57Phosphoadenosine phosphosulfate reductase OS=Geoba... [more]
CYSH_STAHJ2.011e-2134.27Phosphoadenosine phosphosulfate reductase OS=Staph... [more]
CYSH2_BACSU1.702e-2033.14Probable phosphoadenosine phosphosulfate reductase... [more]
CYSH_SALRD6.468e-2037.34Phosphoadenosine phosphosulfate reductase OS=Salin... [more]
CYSH_GLOVI1.882e-1935.54Phosphoadenosine phosphosulfate reductase OS=Gloeo... [more]
CYSH_GEOKA4.192e-1935.06Phosphoadenosine phosphosulfate reductase OS=Geoba... [more]
CYSH_RHOE47.151e-1936.65Phosphoadenosine phosphosulfate reductase OS=Rhodo... [more]
CYSH_MYCTU9.339e-1936.26Probable phosphoadenosine phosphosulfate reductase... [more]
CYSH_MYCTA9.339e-1936.26Phosphoadenosine phosphosulfate reductase OS=Mycob... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_E09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_E09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304947 ID=CB304947; Name=CB304947; organism=Citrus sinensis; type=EST; length=563bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTCCTGGAAGGACAGGC
CTTGTGCATGGCTCACACCCAATTGAGATGTACCCTTGTGTGTGCAAGGA
ATTGATGGGCACATCCATAGTACGAAGGAAGTTCCAAATGTCATTCCCCT
TCACATTAGCCACTGGATTCCACTTCACCAGGCTGCCAACCCCACCTTCC
AGCCCCTCAAAAACTGGATCCTCCTGGACTACAGGGATTTCAGACCTAGT
ACCTGGAGACTGATCTTTCCTTTGGCCAGTGATCCAGGCACGCAATCCCT
TGAGGGCCCTCCGAAGGGGCCTCACTTTCCTCACACGGCAGCACTCCTGG
TGCCCATCCTCATAGAAAGAGAAGAGCCCCTTGCTCCTCACTAATGCCTG
AACTTCAACAGCATCGGGAAACATGTATTCAATACGTATGCCAAAATGTT
TCTCAACTTCGTCAAAGAATCTATATGTTTCTGGGTTTAGCCTTCCAGTA
TCCAGGCTAAACACCCTAAATGGTCTACCAGTTAAATGGGCATACTCGAT
CAAAGCAACATCT
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