CB304947

Overview
NameCB304947
Unique NameCB304947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig360 contig Csv1_Contig360:1..562. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XANAC (Phosphoadenosine phosphosulfate reductase OS=Xanthomonas axonopodis pv. citri GN=cysH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = -2 
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+     G  +   +RKV P+RRAL  L    W TG R+ QS G R++ P++Q+           G   K +P+A+    D+W +L+  D+P + L  QGY+SIG    TR   PG +
Sbjct:   70 VILIDTGYLFPETYRFADALTERLKLNLKVYRPLVSRAWMEARHGRLWEQGMVGIDQYNNLRKVEPMRRALNELDVGTWFTGLRRSQSGG-RAQTPIMQKR----------GERYKISPIADWTDRDVWQYLQAHDLPYHPLWEQGYVSIGDFHTTRRWEPGMR 222
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_MESSB (Phosphoadenosine phosphosulfate reductase OS=Mesorhizobium sp. (strain BNC1) GN=cysH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15
Identity = 51/162 (31.48%), Postives = 84/162 (51.85%), Query Frame = -2 
Query:   32 VFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQ 514
            V  LDTG+   ET  + D++    G+  +  + P +  + A      L   ++     CC +RKV P+ RA++   AW TG+++ Q+  +R+++PV +           VG  ++ NP+A     D   ++R  D+  N L   GY+SIGC PCT+PV PG+
Sbjct:   69 VLFLDTGQHFGETIEYRDQLASDLGLSNLVVVHPKSEMLSARDPGNDL---HKSDSDLCCEIRKVEPMARAVEPYSAWFTGRKRHQAE-SRAQMPVFE----------AVGPRIRINPLARWTTADQAAYMRANDLRENPLVAYGYLSIGCFPCTQPVKPGE 216
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XANCP (Phosphoadenosine phosphosulfate reductase OS=Xanthomonas campestris pv. campestris GN=cysH PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15
Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = -2 
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+     G  +   +RKV P+RRAL  L    W TG R+ QS G R++ P+VQ+           G   K +P+A+    D+W +L+   +P + L  QGY+SIG    TR   PG +
Sbjct:   70 VILIDTGYLFPETYRFADALTERLSLNLQVYRPLVSRAWMEARHGRLWEQGMVGIDQYNNLRKVEPMRRALDELNVGTWFTGLRRSQSGG-RAQTPIVQKR----------GDRYKISPIADWTDRDVWQYLQAHALPYHPLWEQGYVSIGDFHTTRRWEPGMR 222
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XANCB (Phosphoadenosine phosphosulfate reductase OS=Xanthomonas campestris pv. campestris (strain B100) GN=cysH PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15
Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = -2 
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+     G  +   +RKV P+RRAL  L    W TG R+ QS G R++ P+VQ+           G   K +P+A+    D+W +L+   +P + L  QGY+SIG    TR   PG +
Sbjct:   70 VILIDTGYLFPETYRFADALTERLSLNLQVYRPLVSRAWMEARHGRLWEQGMVGIDQYNNLRKVEPMRRALDELNVGTWFTGLRRSQSGG-RAQTPIVQKR----------GDRYKISPIADWTDRDVWQYLQAHALPYHPLWEQGYVSIGDFHTTRRWEPGMR 222
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XANC8 (Phosphoadenosine phosphosulfate reductase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=cysH PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15
Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = -2 
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+     G  +   +RKV P+RRAL  L    W TG R+ QS G R++ P+VQ+           G   K +P+A+    D+W +L+   +P + L  QGY+SIG    TR   PG +
Sbjct:   70 VILIDTGYLFPETYRFADALTERLSLNLQVYRPLVSRAWMEARHGRLWEQGMVGIDQYNNLRKVEPMRRALDELNVGTWFTGLRRSQSGG-RAQTPIVQKR----------GDRYKISPIADWTDRDVWQYLQAHALPYHPLWEQGYVSIGDFHTTRRWEPGMR 222
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACHD (Phosphoadenosine phosphosulfate reductase OS=Bacillus halodurans GN=cysH PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15
Identity = 55/163 (33.74%), Postives = 83/163 (50.92%), Query Frame = -2 
Query:   32 VFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPDAV-EVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQ 514
            V  LDT     ETY   + V++ +  ++++ + P+   E QA      L+    D    CC++RK+ PL + L    AW++G R+DQSP TR+    V ED  F   +  +  L+ W         +IW ++    +P N LH + Y SIGCE CTRPV  G+
Sbjct:   62 VIFLDTDFHFSETYELIERVKERYPKLQLKLVKPELTPEEQAETYGDRLWERQPD---LCCKLRKLVPLEKELAQYDAWMSGLRRDQSP-TRTNTQFVNEDRRFGSTK--ICPLIHWT------SEEIWMYIELHQLPYNDLHDKQYPSIGCEYCTRPVKEGE 212
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACWK (Phosphoadenosine phosphosulfate reductase OS=Bacillus weihenstephanensis (strain KBAB4) GN=cysH PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.812e-15
Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F  + I    P+  ++ QA +  + L   +E     CC +RK+ PL ++L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIKKVRERFPSLNIIEKQPELTLDEQAKLHGEKL---WESNPNLCCSIRKILPLEKSLAAEKAWISGLRREQSE-TRKHTQFINQDRRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDVGYPSIGCEKCTLPVGDG 213
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACC4 (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain B4264) GN=cysH PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.812e-15
Identity = 53/163 (32.52%), Postives = 83/163 (50.92%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F  + I    P+  ++ QA +  + L   +E     CC++RK+ PL ++L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPELTLDEQAKLHGEKL---WESNPNLCCKIRKILPLEKSLVVEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDVGYPSIGCEKCTLPVGDG 213
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACC2 (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain G9842) GN=cysH PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15
Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY     V + F  + I    P+  ++ QA +  + L   +E     CC++RK+ PL ++L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQRVRERFPSLNIIEKQPELTLDEQAKLHGEKL---WESNPNLCCKIRKILPLEKSLVVEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDVGYPSIGCEKCTLPVGDG 213
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACCR (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cysH PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15
Identity = 53/163 (32.52%), Postives = 83/163 (50.92%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F  + I    P+  ++ QA +  + L   +E     CC++RK+ PL ++L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIRKVRERFPSLNIIEKQPELTLDEQAKLHGEKL---WESNPNLCCKIRKILPLEKSLVVEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDVGYPSIGCEKCTLPVGDG 213
The following BLAST results are available for this feature:
BLAST of CB304947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CYSH_XANAC1.649e-1533.54Phosphoadenosine phosphosulfate reductase OS=Xanth... [more]
CYSH_MESSB1.649e-1531.48Phosphoadenosine phosphosulfate reductase OS=Mesor... [more]
CYSH_XANCP2.153e-1533.54Phosphoadenosine phosphosulfate reductase OS=Xanth... [more]
CYSH_XANCB2.153e-1533.54Phosphoadenosine phosphosulfate reductase OS=Xanth... [more]
CYSH_XANC82.153e-1533.54Phosphoadenosine phosphosulfate reductase OS=Xanth... [more]
CYSH_BACHD2.153e-1533.74Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACWK2.812e-1532.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACC42.812e-1532.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACC23.672e-1532.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACCR4.796e-1532.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_E09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_E09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304947 ID=CB304947; Name=CB304947; organism=Citrus sinensis; type=EST; length=563bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTCCTGGAAGGACAGGC
CTTGTGCATGGCTCACACCCAATTGAGATGTACCCTTGTGTGTGCAAGGA
ATTGATGGGCACATCCATAGTACGAAGGAAGTTCCAAATGTCATTCCCCT
TCACATTAGCCACTGGATTCCACTTCACCAGGCTGCCAACCCCACCTTCC
AGCCCCTCAAAAACTGGATCCTCCTGGACTACAGGGATTTCAGACCTAGT
ACCTGGAGACTGATCTTTCCTTTGGCCAGTGATCCAGGCACGCAATCCCT
TGAGGGCCCTCCGAAGGGGCCTCACTTTCCTCACACGGCAGCACTCCTGG
TGCCCATCCTCATAGAAAGAGAAGAGCCCCTTGCTCCTCACTAATGCCTG
AACTTCAACAGCATCGGGAAACATGTATTCAATACGTATGCCAAAATGTT
TCTCAACTTCGTCAAAGAATCTATATGTTTCTGGGTTTAGCCTTCCAGTA
TCCAGGCTAAACACCCTAAATGGTCTACCAGTTAAATGGGCATACTCGAT
CAAAGCAACATCT
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