CB304947

Overview
NameCB304947
Unique NameCB304947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_PHOPR (Phosphoadenosine phosphosulfate reductase OS=Photobacterium profundum GN=cysH PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13
Identity = 51/162 (31.48%), Postives = 81/162 (50.00%), Query Frame = -2
Query:   35 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 514
            V   DTG L PETY+F D++     + +     +        R   L+    DG ++  R+ KV P+RRAL  L   AW +G R++QS  +R+ +PV+        ++ GV    K+ P+ +   NDI  +L   D+P + L  +GY+S+G    T+   PG
Sbjct:   74 VILTDTGYLFPETYQFIDQLTLRLSLNLYVYRAEISSAWQEARHGKLWEQGVDGIKQYNRLNKVEPMRRALDELNVSAWFSGLRREQS-SSRASLPVL-------AIQNGV---FKFLPLIDWTDNDIEQYLNQYDLPYHPLRDEGYLSMGDTHTTKKWEPG 224          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_VIBFM (Phosphoadenosine phosphosulfate reductase OS=Vibrio fischeri (strain MJ11) GN=cysH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = -2
Query:   35 DTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 502
            DTG L PETY+F D++     + +     D        R   L+    +G ++  ++ KV+P+RRAL  L    W +G R++QS G+R+ +P++        ++ GV    K+ PV +    ++  FL+  D+P + L  QGY+S+G    T+   PG
Sbjct:   78 DTGYLFPETYQFIDQLTDRLNLNLHVFTADESPNWQEARYGKLWEQGVEGIEKYNKLNKVQPMRRALDQLEVGIWFSGLRREQS-GSRANLPILS-------IQNGV---FKFLPVLDWTNKEVHYFLKEYDLPYHPLWDQGYLSVGDTHTTQKWEPG 224          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_VIBF1 (Phosphoadenosine phosphosulfate reductase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=cysH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = -2
Query:   35 DTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 502
            DTG L PETY+F D++     + +     D        R   L+    +G ++  ++ KV+P+RRAL  L    W +G R++QS G+R+ +P++        ++ GV    K+ PV +    ++  FL+  D+P + L  QGY+S+G    T+   PG
Sbjct:   78 DTGYLFPETYQFIDQLTDRLNLNLHVFTADESPNWQEARYGKLWEQGVEGIEKYNKLNKVQPMRRALDQLEIGVWFSGLRREQS-GSRANLPILS-------IQNGV---FKFLPVLDWTNKEVHYFLKEYDLPYHPLWDQGYLSVGDTHTTQKWEPG 224          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_ENTS8 (Phosphoadenosine phosphosulfate reductase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=cysH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12
Identity = 49/162 (30.25%), Postives = 81/162 (50.00%), Query Frame = -2
Query:   35 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 514
            V   DTG L PETYRF DE+ +   + ++    +        R   L+    +G ++   + KV P+ RALK L A  W  G R+DQS G+R+ +PV+       G++ GV  ++   P+ +     ++ +L+   +  + L  +GY+S+G    TR   PG
Sbjct:   74 VILTDTGYLFPETYRFIDELTEKLNLNLKIYRAEQSPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRRDQS-GSRANLPVL-------GVQRGVFKIL---PIIDWDNRTVYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPG 224          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_ALTMD (Phosphoadenosine phosphosulfate reductase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=cysH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.964e-12
Identity = 46/147 (31.29%), Postives = 74/147 (50.34%), Query Frame = -2
Query:   68 DTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIG 502
            DTG L PETY+F DE+ +   + +     D        R   L+    +G ++  ++ KV P++RAL+ L A  W  G R+ QS  TR ++PV+Q+          VG   K  P+ +    D+  +L+  ++  + L  QGY+SIG
Sbjct:   78 DTGYLFPETYKFIDELVEKLNLNLHVYRADMSSAWQEARFGRLWEQGVEGIEKYNKLNKVEPMQRALRELNAGTWFAGLRRSQS-DTRGKLPVLQK----------VGQQFKLYPIIDWSNKDLHYYLKDNELSYHPLWEQGYVSIG 213          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_ALHEH (Phosphoadenosine phosphosulfate reductase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=cysH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11
Identity = 48/163 (29.45%), Postives = 78/163 (47.85%), Query Frame = -2
Query:   35 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRS-EIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 514
            V  +DTG L PETYRF DE+ +  G+ ++   P         R   L+    +G +   R+ KV P+++AL+  G  AW  G R+ Q+   +  ++  +Q D             VK +P+ +    D+  +L   D+P + L  +GY+SIG    TR +  G
Sbjct:   74 VVLVDTGYLFPETYRFVDELTERLGLNLQVARPAHSAAWQEARFGRLWEQGVEGIERYNRMNKVEPMQQALETLGADAWFAGLRRQQAHSRQQRQVVEIQND------------RVKVHPIIDWTDRDVHRYLTRHDLPYHPLWHEGYVSIGDVHTTRRLADG 224          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_SODGM (Phosphoadenosine phosphosulfate reductase OS=Sodalis glossinidius (strain morsitans) GN=cysH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11
Identity = 49/162 (30.25%), Postives = 78/162 (48.15%), Query Frame = -2
Query:   35 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 514
            V   DTG L PETYRF DE+ +  G+ ++             R   L+    +G +   ++ KV P+ RAL  L A  W  G R++QS G+R+ +PV+        ++ GV  L+   P+ +     ++ +L    +  + L  QGY+S+G    TR   PG
Sbjct:   74 VILTDTGYLFPETYRFIDELTETLGLNLQIFRATTSPAWQEARYGKLWEQGVEGIERYNQLNKVEPMNRALATLGAGTWFAGLRREQS-GSRAHLPVL-------AIQRGVFKLL---PIIDWDNRQVYQYLTRHGLSYHPLWEQGYLSVGDTHTTRKCEPG 224          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_SHEON (Phosphoadenosine phosphosulfate reductase OS=Shewanella oneidensis GN=cysH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11
Identity = 46/159 (28.93%), Postives = 73/159 (45.91%), Query Frame = -2
Query:   44 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPV 514
            V   DTG L PETY+F D++ +   + ++             R   L+    +G +   R+ KV P++RAL  L    W  G R+ QS  TR E+P++             GS  K  P+      D+  +L   D+P + L  QGY+S+G    ++P+
Sbjct:   74 VILTDTGYLFPETYQFIDQLTERLSLNLKVYQAPITSAWQEARFGQLWEQGVEGLERYNRLNKVEPMQRALAELEVGTWFAGLRRSQS-STREELPILAIH----------GSRFKLLPIIEWSNKDVHLYLTQFDLPYHPLWEQGYVSVGDTHSSKPL 221          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_VIBCM (Phosphoadenosine phosphosulfate reductase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=cysH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = -2
Query:   35 DTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 502
            DTG L PETY+F DE+ +   + ++             R   L+    +G +   ++ KV P+RRAL  L    W +G R++QS  +R+ +P++        ++ GV    K+ PV +    ++  +L+  D+P + L  QGY+S+G    T+   PG
Sbjct:   81 DTGYLFPETYQFIDELTERLNLNLKVYSAPVSAAWQEARYGKLWEQGVEGIERYNQINKVEPMRRALDELNIGTWFSGLRREQSQ-SRASLPILS-------VQNGV---FKFLPVIDWTNKEVHYYLKDNDLPYHPLWEQGYLSVGDTHTTQKWQPG 227          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_VIBCH (Phosphoadenosine phosphosulfate reductase OS=Vibrio cholerae GN=cysH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = -2
Query:   35 DTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 502
            DTG L PETY+F DE+ +   + ++             R   L+    +G +   ++ KV P+RRAL  L    W +G R++QS  +R+ +P++        ++ GV    K+ PV +    ++  +L+  D+P + L  QGY+S+G    T+   PG
Sbjct:   81 DTGYLFPETYQFIDELTERLNLNLKVYSAPVSAAWQEARYGKLWEQGVEGIERYNQINKVEPMRRALDELNIGTWFSGLRREQSQ-SRASLPILS-------VQNGV---FKFLPVIDWTNKEVHYYLKDNDLPYHPLWEQGYLSVGDTHTTQKWQPG 227          
The following BLAST results are available for this feature:
BLAST of CB304947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CYSH_PHOPR7.658e-1331.48Phosphoadenosine phosphosulfate reductase OS=Photo... [more]
CYSH_VIBFM1.706e-1230.38Phosphoadenosine phosphosulfate reductase OS=Vibri... [more]
CYSH_VIBF11.706e-1230.38Phosphoadenosine phosphosulfate reductase OS=Vibri... [more]
CYSH_ENTS83.800e-1230.25Phosphoadenosine phosphosulfate reductase OS=Enter... [more]
CYSH_ALTMD4.964e-1231.29Phosphoadenosine phosphosulfate reductase OS=Alter... [more]
CYSH_ALHEH1.444e-1129.45Phosphoadenosine phosphosulfate reductase OS=Alkal... [more]
CYSH_SODGM1.886e-1130.25Phosphoadenosine phosphosulfate reductase OS=Sodal... [more]
CYSH_SHEON1.886e-1128.93Phosphoadenosine phosphosulfate reductase OS=Shewa... [more]
CYSH_VIBCM2.463e-1129.11Phosphoadenosine phosphosulfate reductase OS=Vibri... [more]
CYSH_VIBCH2.463e-1129.11Phosphoadenosine phosphosulfate reductase OS=Vibri... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_E09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_E09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304947 ID=CB304947; Name=CB304947; organism=Citrus sinensis; type=EST; length=563bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTCCTGGAAGGACAGGC
CTTGTGCATGGCTCACACCCAATTGAGATGTACCCTTGTGTGTGCAAGGA
ATTGATGGGCACATCCATAGTACGAAGGAAGTTCCAAATGTCATTCCCCT
TCACATTAGCCACTGGATTCCACTTCACCAGGCTGCCAACCCCACCTTCC
AGCCCCTCAAAAACTGGATCCTCCTGGACTACAGGGATTTCAGACCTAGT
ACCTGGAGACTGATCTTTCCTTTGGCCAGTGATCCAGGCACGCAATCCCT
TGAGGGCCCTCCGAAGGGGCCTCACTTTCCTCACACGGCAGCACTCCTGG
TGCCCATCCTCATAGAAAGAGAAGAGCCCCTTGCTCCTCACTAATGCCTG
AACTTCAACAGCATCGGGAAACATGTATTCAATACGTATGCCAAAATGTT
TCTCAACTTCGTCAAAGAATCTATATGTTTCTGGGTTTAGCCTTCCAGTA
TCCAGGCTAAACACCCTAAATGGTCTACCAGTTAAATGGGCATACTCGAT
CAAAGCAACATCT
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