CB304959

Overview
NameCB304959
Unique NameCB304959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_NATPD (Gamma-glutamyl phosphate reductase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=proA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.668e-30
Identity = 62/115 (53.91%), Postives = 87/115 (75.65%), Query Frame = -1
Query:  256 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHK 591
            ++  +++VD + +AIDHI+ +GS HT+ IV ED   A TF+ ++DSA+VFHNASTRF DG RFGLGAEVGIST +IHARGPVG++GL T ++ L G+GH+V    G+    ++H+
Sbjct:  316 LIVAIKVVDSLESAIDHINTNGSKHTESIVTEDDGRASTFMRRLDSASVFHNASTRFSDGYRFGLGAEVGISTGKIHARGPVGLKGLTTYKYHLEGDGHLVATYAGEDAKPFSHE 430          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_SYNPW (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain WH7803) GN=proA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.001e-29
Identity = 65/118 (55.08%), Postives = 83/118 (70.34%), Query Frame = -1
Query:  244 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV-VDGDQGVV-YTHKNLAL 591
            +   V++VDD+ AA DHI + GS HT+CIV ED   A+ FL  +DSA V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG+GHV  D   G   +TH +L+L
Sbjct:  318 LTLAVKVVDDLAAAADHIRRFGSRHTECIVTEDAAAADRFLSSIDSAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGDGHVAADYASGASRFTHNDLSL 435          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_PROMM (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=proA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.231e-29
Identity = 64/118 (54.24%), Postives = 86/118 (72.88%), Query Frame = -1
Query:  244 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV-DGDQG-VVYTHKNLAL 591
            ++ +V++V D+  A+DHI ++ S HT+ IV+ DQ+ AE FL  VDSA VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG GH+V D   G  ++TH++L L
Sbjct:  321 LILSVKVVPDLEGALDHIRRYSSRHTEAIVSNDQETAERFLQAVDSAGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGQGHIVADYANGECMFTHRDLPL 438          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_SYNY3 (Probable gamma-glutamyl phosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=proA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.446e-28
Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = -1
Query:  250 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 591
            ++ +++IVD + AAIDHI+Q+GS HTD I++ED   AE F  +VDSA V+HN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ L G+GH+     G     +TH +L
Sbjct:  317 LILSIKIVDSLEAAIDHINQYGSKHTDGIISEDLTAAEQFCQRVDSAGVYHNCSTRFADGFRYGFGAEVGISTQKMPPRGPVGLEGLVTYKYQLWGHGHIAATYTGQGAKAFTHLDL 433          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_MAGSA (Gamma-glutamyl phosphate reductase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=proA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.446e-28
Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = -1
Query:  283 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDG 588
            + +V +VD V AA++HI+ HGS HT+ IVAED +VAETFL   DSA V  NAST+F DG  FG+GAE+GIST ++HARGPVGVE L T +++++GNG V  G
Sbjct:  322 IISVGVVDGVGAAVEHINTHGSHHTEAIVAEDSQVAETFLNGCDSAIVLWNASTQFADGGEFGMGAEIGISTGKMHARGPVGVEQLCTFKYVVKGNGQVRPG 423          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_THIDA (Gamma-glutamyl phosphate reductase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=proA PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.889e-28
Identity = 59/99 (59.60%), Postives = 76/99 (76.77%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            +  V++VDD+ AA+ HI+ HGS HTD IV ED   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +W++ G+GHV
Sbjct:  325 IIAVKVVDDLDAAMIHINTHGSQHTDAIVTEDYGRARRFLREVDSASVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWVVLGDGHV 423          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_TRIEI (Gamma-glutamyl phosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.467e-28
Identity = 59/116 (50.86%), Postives = 83/116 (71.55%), Query Frame = -1
Query:  253 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 591
            +V +V++VD + +AI HI+ +GS HTD I+ ED K AE FL Q+ SA VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ + G+GH+     G+    +TH++
Sbjct:  315 LVLSVKVVDSLDSAIAHINNYGSGHTDAIITEDGKAAEIFLAQIGSAGVFHNCSTRFSDGFRYGFGAEVGISTQKMPPRGPVGLEGLVTYKYQIVGDGHIAATYSGENAKPFTHQD 430          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_SPHWW (Gamma-glutamyl phosphate reductase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.467e-28
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            + +V IVD V  A+ HI +H S HTD IV EDQ  A+ FL  VDSA V HNAST+F DG  FGLGAE+GIST R+HARGPV +EGL T +W++RG G +
Sbjct:  329 ILSVAIVDGVDGAMAHIARHSSHHTDAIVTEDQPTADRFLAGVDSAIVMHNASTQFADGGEFGLGAEIGISTGRLHARGPVALEGLTTYKWLVRGEGQL 427          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_PROM3 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.467e-28
Identity = 63/118 (53.39%), Postives = 85/118 (72.03%), Query Frame = -1
Query:  244 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV-DGDQG-VVYTHKNLAL 591
            ++ +V++V D+  A+DHI ++ S HT+ IV+ DQ+ AE FL  VDSA VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG G +V D   G  ++TH++L L
Sbjct:  321 LILSVKVVPDLEGALDHIRRYSSRHTEAIVSNDQETAERFLQVVDSAGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGQGQIVADYANGECMFTHRDLPL 438          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_THEEB (Gamma-glutamyl phosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=proA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28
Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = -1
Query:  250 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 591
            ++  +++V D+ AA+DHI  +GS HT+ IV ED   A  FL +VD+A VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ L GNGH+V    G     +TH++L
Sbjct:  321 LILAIKVVPDLDAALDHIATYGSGHTEAIVTEDAAAAARFLQEVDAAGVFHNCSTRFADGFRYGFGAEVGISTHKLPPRGPVGLEGLVTYKYQLVGNGHIVATYSGANARPFTHRDL 437          
The following BLAST results are available for this feature:
BLAST of CB304959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_NATPD7.668e-3053.91Gamma-glutamyl phosphate reductase OS=Natronomonas... [more]
PROA_SYNPW1.001e-2955.08Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PROMM2.231e-2954.24Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNY31.446e-2852.14Probable gamma-glutamyl phosphate reductase OS=Syn... [more]
PROA_MAGSA1.446e-2858.82Gamma-glutamyl phosphate reductase OS=Magnetospiri... [more]
PROA_THIDA1.889e-2859.60Gamma-glutamyl phosphate reductase OS=Thiobacillus... [more]
PROA_TRIEI2.467e-2850.86Gamma-glutamyl phosphate reductase OS=Trichodesmiu... [more]
PROA_SPHWW2.467e-2859.60Gamma-glutamyl phosphate reductase OS=Sphingomonas... [more]
PROA_PROM32.467e-2853.39Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_THEEB4.208e-2851.28Gamma-glutamyl phosphate reductase OS=Thermosynech... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_G02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_G02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304959 ID=CB304959; Name=CB304959; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAATTCAAATTCTGAACTT
CATTATTGACTTGAGGAAACTTTCTATTACATGAGGCTCTACCCCAAGCA
AGATCCAAGTAATAAAACTAAAGATCTTAATAAATAACATCAGCAAAGTG
CAATAAATATACACCAAGTAAATAGAGTCTCAGAAGCAGCTACCATAATA
TTATACAAATGACATGGTTTAGAACCATAAGTTACTAGGATTGCAAGGCA
AGATTCTTGTGGGTATAGACGACTCCTTGATCACCATCTACGACGTGTCC
ATTCCCTCTCAATATCCATCGAGTAGTTAGCAATCCTTCAACTCCGACTG
GACCACGAGCATGAATCCTGCTTGTGCTTATTCCAACCTCTGCACCAAGT
CCAAATCGTGCTCCATCACAGAATCGTGTACTTGCATTATGAAATACTGC
AGCACTGTCAACTTGACATAAAAATGTTTCAGCAACTTTTTGATCTTCTG
CAACAATGCAATCAGTATGGGCACTTCCATGTTGATGAATATGGTCAATA
GCAGCACGCACATCGTCCACAATTTCAACCGTACAAACCAT
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