CB304959

Overview
NameCB304959
Unique NameCB304959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_CYAP4 (Gamma-glutamyl phosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=proA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.599e-27
Identity = 59/117 (50.43%), Postives = 84/117 (71.79%), Query Frame = -1
Query:  250 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 591
            ++ ++++V D+ +AI+HI+ +GS HT+ IV  D+  A TFL +VD+A VFHN STRF DG R+GLGAEVGIST ++  RGPVG+EGL+T ++ L G G VV    G     +TH++L
Sbjct:  317 LILSIKVVADLESAINHINTYGSRHTEAIVTADENAATTFLHEVDAAGVFHNCSTRFADGFRYGLGAEVGISTHKLPPRGPVGLEGLVTYKYQLVGQGQVVSTYSGPSAKPFTHRDL 433          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_PROM5 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=proA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.088e-27
Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = -1
Query:  250 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQGVVYTHKNL 591
            ++ +++IVDD+   I HI +  S HTD I+ E+   A  F+ ++DSA VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T ++ LRG GH VD       +YTHK+L
Sbjct:  321 LILSIKIVDDLEEGIAHIQKFSSKHTDGIITENISNANKFMSEIDSAGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYKYFLRGEGHSVDDFSSGKSIYTHKDL 436          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_METCA (Gamma-glutamyl phosphate reductase OS=Methylococcus capsulatus GN=proA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.088e-27
Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            +  V +V  +  AI+HIH+HGS HTD IV ED   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL T ++I+ G+GHV
Sbjct:  330 ILAVRVVAGLDEAIEHIHRHGSGHTDAIVTEDYGRARRFLREVDSASVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTTQKFIVLGDGHV 428          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_METBF (Gamma-glutamyl phosphate reductase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=proA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.088e-27
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = -1
Query:  241 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNLALQ 591
            ++ ++++VD ++ AIDHI+  GS HTD I+ ED    + F   VDS++V  NASTRF DG R+G GAEVGIST++IH+RGPVG+EGLL  ++IL G G VV    G+    YTH+ L L+
Sbjct:  323 LILSIKLVDTIKEAIDHINTFGSHHTDGIITEDASRRKAFTALVDSSSVMVNASTRFADGYRYGKGAEVGISTNKIHSRGPVGMEGLLIYKYILLGKGQVVADYAGENAKPYTHRKLDLK 442          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_ACAM1 (Gamma-glutamyl phosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=proA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.088e-27
Identity = 59/117 (50.43%), Postives = 81/117 (69.23%), Query Frame = -1
Query:  250 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 591
            ++ ++++V  +  AI HI+Q+GS HTD I  ED + A  F+ QVD+A VFHN STRF DG R+G GAEVGIST R+  RGPVG+EGL+T ++ L+G G +V    G     +THK+L
Sbjct:  315 LIVSIKVVASLSDAIAHINQYGSGHTDAIATEDDQAAAVFMNQVDAAGVFHNCSTRFADGFRYGFGAEVGISTQRMPPRGPVGLEGLVTYKYQLKGQGQIVATYAGSDARPFTHKDL 431          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_RHOPS (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris (strain BisB5) GN=proA PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.727e-27
Identity = 58/97 (59.79%), Postives = 69/97 (71.13%), Query Frame = -1
Query:  298 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 588
            V   ++VDDV  AI HIH+HGS HTD IVAED K A  FL +VDSA V HNAST+F DG  FG GAE+GI+T + HARGPVG E L T ++ + G G
Sbjct:  330 VIAAKVVDDVDDAITHIHEHGSHHTDAIVAEDAKTAAKFLGEVDSAIVLHNASTQFADGGEFGFGAEIGIATGKFHARGPVGAEQLTTFKYRIHGTG 426          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_HALWD (Gamma-glutamyl phosphate reductase OS=Haloquadratum walsbyi (strain DSM 16790) GN=proA PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.727e-27
Identity = 57/100 (57.00%), Postives = 76/100 (76.00%), Query Frame = -1
Query:  289 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV 588
            + ++ +VD +  AIDHI+ +GS HT+ I+ +D   AE F+  VD+A+VFHNASTRF DG RFGLGAEVGIST +IHARGPVG++GL T ++ L G+G  V
Sbjct:  330 IVSIAVVDSLTDAIDHINMYGSKHTESILTQDDNRAEQFMRAVDAASVFHNASTRFADGFRFGLGAEVGISTGKIHARGPVGLDGLTTYKYHLEGDGQQV 429          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_PROMT (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=proA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27
Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = -1
Query:  244 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV----DGDQGVVYTHKNLAL 591
            ++ +++IV +V  AI+HI ++ S HT+ IV ED+ VAE FL  VDSA V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG+G +V     GD+   ++H +L L
Sbjct:  321 LILSIKIVRNVNEAIEHIRKYSSRHTEAIVTEDKMVAEKFLSSVDSAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYYLRGDGDLVKDFASGDRS--FSHIDLPL 438          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_PROM1 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=proA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27
Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = -1
Query:  244 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV----DGDQGVVYTHKNLAL 591
            ++ +++IV +V  AI+HI ++ S HT+ IV ED+ VAE FL  VDSA V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG+G +V     GD+   ++H +L L
Sbjct:  321 LILSIKIVRNVNEAIEHIRKYSSRHTEAIVTEDKMVAEKFLSSVDSAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYYLRGDGDLVKDFASGDRS--FSHIDLPL 438          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_METBU (Gamma-glutamyl phosphate reductase OS=Methanococcoides burtonii (strain DSM 6242) GN=proA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27
Identity = 59/116 (50.86%), Postives = 84/116 (72.41%), Query Frame = -1
Query:  250 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 588
            + ++++VD +  AIDHI+++GS HTD I+ E++   + F+  VDS++V  NASTRF DG R+G GAEVGIST++IHARGPVG+EGL+  +++L GNG  V    GD    +THK L
Sbjct:  324 ILSIKLVDSIEEAIDHINKYGSHHTDAIITENKTKRKQFIALVDSSSVMVNASTRFADGFRYGKGAEVGISTNKIHARGPVGMEGLVIYKYVLLGNGDKVATYAGDTPRPFTHKEL 439          
The following BLAST results are available for this feature:
BLAST of CB304959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_CYAP41.599e-2750.43Gamma-glutamyl phosphate reductase OS=Cyanothece s... [more]
PROA_PROM52.088e-2750.86Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_METCA2.088e-2758.59Gamma-glutamyl phosphate reductase OS=Methylococcu... [more]
PROA_METBF2.088e-2750.83Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_ACAM12.088e-2750.43Gamma-glutamyl phosphate reductase OS=Acaryochlori... [more]
PROA_RHOPS2.727e-2759.79Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_HALWD2.727e-2757.00Gamma-glutamyl phosphate reductase OS=Haloquadratu... [more]
PROA_PROMT3.562e-2751.67Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM13.562e-2751.67Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_METBU3.562e-2750.86Gamma-glutamyl phosphate reductase OS=Methanococco... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_G02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_G02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304959 ID=CB304959; Name=CB304959; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAATTCAAATTCTGAACTT
CATTATTGACTTGAGGAAACTTTCTATTACATGAGGCTCTACCCCAAGCA
AGATCCAAGTAATAAAACTAAAGATCTTAATAAATAACATCAGCAAAGTG
CAATAAATATACACCAAGTAAATAGAGTCTCAGAAGCAGCTACCATAATA
TTATACAAATGACATGGTTTAGAACCATAAGTTACTAGGATTGCAAGGCA
AGATTCTTGTGGGTATAGACGACTCCTTGATCACCATCTACGACGTGTCC
ATTCCCTCTCAATATCCATCGAGTAGTTAGCAATCCTTCAACTCCGACTG
GACCACGAGCATGAATCCTGCTTGTGCTTATTCCAACCTCTGCACCAAGT
CCAAATCGTGCTCCATCACAGAATCGTGTACTTGCATTATGAAATACTGC
AGCACTGTCAACTTGACATAAAAATGTTTCAGCAACTTTTTGATCTTCTG
CAACAATGCAATCAGTATGGGCACTTCCATGTTGATGAATATGGTCAATA
GCAGCACGCACATCGTCCACAATTTCAACCGTACAAACCAT
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