CB304959

Overview
NameCB304959
Unique NameCB304959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_TERTT (Gamma-glutamyl phosphate reductase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=proA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.652e-27
Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = -1
Query:  286 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD 588
            +  + +VDD+ AA+DHI  H SAHT+ IV E+   A  F+  VDSA+V  NASTRF DG ++GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +++
Sbjct:  318 ILAIRVVDDMTAAMDHIAAHSSAHTESIVTENYTKARKFMALVDSASVMVNASTRFADGFQYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVFGDGEILN 418          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_SYNS9 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9902) GN=proA PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.652e-27
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = -1
Query:  244 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV-VDGDQG-VVYTHKNLAL 591
            +  +V +VDD+  A +HI ++GS HT+ I+ ED   A+ FL  VDSA V+HN S+RF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRGNGH+  D   G   +TH++L L
Sbjct:  320 LTLSVRVVDDLACATEHIRRYGSRHTEVILTEDLATADRFLAAVDSAGVYHNCSSRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGNGHIAADYAAGRRSFTHQDLPL 437          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_PROMP (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=proA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.652e-27
Identity = 56/116 (48.28%), Postives = 82/116 (70.69%), Query Frame = -1
Query:  250 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQGVVYTHKNL 591
            ++ +++IV+D+  AI HI +  S HTD I+ E+   A  F+ ++DS+ VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T ++ LRG GH+VD      ++Y+HK++
Sbjct:  321 LILSIKIVNDLEEAIAHIQKFSSKHTDGIITENINNANKFMSEIDSSGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYKYFLRGEGHIVDDFSSGKLIYSHKDV 436          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_NOSP7 (Gamma-glutamyl phosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=proA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.652e-27
Identity = 57/116 (49.14%), Postives = 81/116 (69.83%), Query Frame = -1
Query:  250 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 588
            + +++IVD +  AI HI+++GS HTD I+ ED    ETF   V+SA +FHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ + G+GH+V    G     +TH++L
Sbjct:  319 ILSIKIVDSIEDAIAHINEYGSRHTDAIITEDSTSVETFFGLVNSANIFHNCSTRFADGFRYGFGAEVGISTQQMPPRGPVGLEGLVTYKYQMTGDGHIVATYTGANAKAFTHRDL 434          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_ANAVT (Gamma-glutamyl phosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=proA PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.652e-27
Identity = 58/115 (50.43%), Postives = 80/115 (69.57%), Query Frame = -1
Query:  253 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 588
            + +++IVD +  AI HI+Q+GS HTD I+ ED    ETF   V+SA VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ + G GH+V    G+    +TH++
Sbjct:  319 ILSIKIVDSLTEAIAHINQYGSRHTDAIITEDVAAVETFFGLVNSAGVFHNCSTRFADGFRYGFGAEVGISTQQMPPRGPVGLEGLVTYKYQMTGTGHIVATYTGENAKPFTHQD 433          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_SPHAL (Gamma-glutamyl phosphate reductase OS=Sphingopyxis alaskensis GN=proA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.076e-27
Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            + ++ +VD +  A+ HI  H S HTD IV ED   AE FL  VDSA V HNAST+F DG  FGLGAE+GI+T R+HARGPV +EGL T +W++RG+G +
Sbjct:  329 IVSIAMVDGLDGALAHIDAHSSRHTDAIVTEDAATAERFLTGVDSAIVMHNASTQFADGGEFGLGAEIGIATGRLHARGPVALEGLTTYKWLVRGSGQL 427          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_SACD2 (Gamma-glutamyl phosphate reductase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=proA PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 6.076e-27
Identity = 53/99 (53.54%), Postives = 78/99 (78.79%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            + ++++V ++  AI+HI+ HGS HTD +V+E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+GH+
Sbjct:  322 ILSIKLVANMDEAIEHINNHGSHHTDALVSENYTLARKFLTEVDSSSVMINASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVFGDGHI 420          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_SILPO (Gamma-glutamyl phosphate reductase OS=Silicibacter pomeroyi GN=proA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.935e-27
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = -1
Query:  298 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 591
            M+   ++VDDV AAI HI Q+GS HTDC++ ED  VA  F  ++DSA + HNAST+F DG  FG+GAE+GI+T ++HARGPVG   L + ++++RGNG
Sbjct:  316 MIIAAKVVDDVDAAIAHIRQYGSNHTDCVITEDDAVAARFFERLDSAILMHNASTQFADGGEFGMGAEIGIATGKMHARGPVGAAQLTSFKYLVRGNG 413          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_ANASP (Gamma-glutamyl phosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=proA PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 7.935e-27
Identity = 58/115 (50.43%), Postives = 80/115 (69.57%), Query Frame = -1
Query:  253 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 588
            + +++IVD +  AI HI+Q+GS HTD I+ ED    +TF   V+SA VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ + G GH+V    G+    +THK+
Sbjct:  319 ILSIKIVDSLTEAIAHINQYGSRHTDAIITEDVAAVKTFFGLVNSAGVFHNCSTRFADGFRYGFGAEVGISTQQMPPRGPVGLEGLVTYKYQMTGAGHIVATYTGENAKPFTHKD 433          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_ALCBS (Gamma-glutamyl phosphate reductase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=proA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.935e-27
Identity = 53/99 (53.54%), Postives = 76/99 (76.77%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            V  V+IVD +  AI+HI+++ S HT+ I+ E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +W++ G+GH+
Sbjct:  323 VLAVKIVDGINDAIEHINRYSSGHTEAIITENYTLARRFLTEVDSSSVMVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWVVLGDGHI 421          
The following BLAST results are available for this feature:
BLAST of CB304959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_TERTT4.652e-2754.46Gamma-glutamyl phosphate reductase OS=Teredinibact... [more]
PROA_SYNS94.652e-2751.69Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PROMP4.652e-2748.28Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_NOSP74.652e-2749.14Gamma-glutamyl phosphate reductase OS=Nostoc punct... [more]
PROA_ANAVT4.652e-2750.43Gamma-glutamyl phosphate reductase OS=Anabaena var... [more]
PROA_SPHAL6.076e-2755.56Gamma-glutamyl phosphate reductase OS=Sphingopyxis... [more]
PROA_SACD26.076e-2753.54Gamma-glutamyl phosphate reductase OS=Saccharophag... [more]
PROA_SILPO7.935e-2754.08Gamma-glutamyl phosphate reductase OS=Silicibacter... [more]
PROA_ANASP7.935e-2750.43Gamma-glutamyl phosphate reductase OS=Anabaena sp.... [more]
PROA_ALCBS7.935e-2753.54Gamma-glutamyl phosphate reductase OS=Alcanivorax ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_G02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_G02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304959 ID=CB304959; Name=CB304959; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAATTCAAATTCTGAACTT
CATTATTGACTTGAGGAAACTTTCTATTACATGAGGCTCTACCCCAAGCA
AGATCCAAGTAATAAAACTAAAGATCTTAATAAATAACATCAGCAAAGTG
CAATAAATATACACCAAGTAAATAGAGTCTCAGAAGCAGCTACCATAATA
TTATACAAATGACATGGTTTAGAACCATAAGTTACTAGGATTGCAAGGCA
AGATTCTTGTGGGTATAGACGACTCCTTGATCACCATCTACGACGTGTCC
ATTCCCTCTCAATATCCATCGAGTAGTTAGCAATCCTTCAACTCCGACTG
GACCACGAGCATGAATCCTGCTTGTGCTTATTCCAACCTCTGCACCAAGT
CCAAATCGTGCTCCATCACAGAATCGTGTACTTGCATTATGAAATACTGC
AGCACTGTCAACTTGACATAAAAATGTTTCAGCAACTTTTTGATCTTCTG
CAACAATGCAATCAGTATGGGCACTTCCATGTTGATGAATATGGTCAATA
GCAGCACGCACATCGTCCACAATTTCAACCGTACAAACCAT
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