CB304959

Overview
NameCB304959
Unique NameCB304959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_BURP1 (Gamma-glutamyl phosphate reductase OS=Burkholderia pseudomallei (strain 1710b) GN=proA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.146e-25
Identity = 55/97 (56.70%), Postives = 74/97 (76.29%), Query Frame = -1
Query:  298 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 588
            V  ++IVD + AAI+HI+++GS HTD IV ED   A  FL +VDSA+V  NASTRF DG  FGLGAE+GIS  ++HARGPVG+EGL + ++++ G+G
Sbjct:  323 VLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 419          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_BURMA (Gamma-glutamyl phosphate reductase OS=Burkholderia mallei GN=proA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.146e-25
Identity = 55/97 (56.70%), Postives = 74/97 (76.29%), Query Frame = -1
Query:  298 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 588
            V  ++IVD + AAI+HI+++GS HTD IV ED   A  FL +VDSA+V  NASTRF DG  FGLGAE+GIS  ++HARGPVG+EGL + ++++ G+G
Sbjct:  323 VLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 419          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_METNO (Gamma-glutamyl phosphate reductase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=proA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.496e-25
Identity = 56/99 (56.57%), Postives = 69/99 (69.70%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            V  V +V+ + AAIDHI   GS HTD IV  D   AE FL +VDSA V HNAST+F DG  FG GAE+GI+T R+HARGPVGVE L T ++ + G+G +
Sbjct:  331 VIAVRVVEGLDAAIDHIETFGSHHTDAIVTHDTGAAERFLAEVDSAIVVHNASTQFADGGEFGFGAEIGIATGRMHARGPVGVEQLTTFKYRVHGSGQI 429          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_BURXL (Gamma-glutamyl phosphate reductase OS=Burkholderia xenovorans (strain LB400) GN=proA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.496e-25
Identity = 54/97 (55.67%), Postives = 74/97 (76.29%), Query Frame = -1
Query:  298 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 588
            V  +++VDD+ AAI+HI+++ S HTD IV ED   A  FL +VDSA+V  NASTRF DG  FGLGAE+GIS  ++HARGPVG+EGL + ++++ G+G
Sbjct:  323 VLAIKVVDDLDAAIEHINEYSSQHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 419          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_ACIAD (Gamma-glutamyl phosphate reductase OS=Acinetobacter sp. (strain ADP1) GN=proA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.954e-25
Identity = 51/99 (51.52%), Postives = 74/99 (74.75%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            +  +++V+ +  AI+HI+++GS HTD IV E+      FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +
Sbjct:  321 ILAIKVVEHIDQAIEHINKYGSHHTDAIVTENYSKVRKFLAEVDSSSVMINASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVFGDGQI 419          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_NITOC (Gamma-glutamyl phosphate reductase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=proA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.553e-25
Identity = 54/96 (56.25%), Postives = 71/96 (73.96%), Query Frame = -1
Query:  292 VEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 579
            + IV  +  AI+HI  +GS HT+ IV ED   A  FL +VDS++V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + +WI+ GNGH+
Sbjct:  321 IRIVAGLDEAIEHITHYGSHHTETIVTEDFTRARRFLTEVDSSSVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSQKWIVLGNGHI 416          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_PSEU5 (Gamma-glutamyl phosphate reductase OS=Pseudomonas stutzeri (strain A1501) GN=proA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.334e-25
Identity = 52/99 (52.53%), Postives = 76/99 (76.77%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            + ++ ++D +  AI+HI+++GS HTD IV E+   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++++ G+GHV
Sbjct:  321 ILSIRMLDSLDEAIEHINRYGSQHTDAIVTENFTDARRFLTEVDSASVMINASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSEKYVVFGDGHV 419          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_METRJ (Gamma-glutamyl phosphate reductase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=proA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.334e-25
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            +  V +VD + AAI+HI  +GS HTD I+ E+   A  FL +VDSA V HNAST+F DG  FG GAE+GI+T R+HARGPVGVE L T ++ + G G +
Sbjct:  332 IIAVRVVDGIEAAIEHIETYGSHHTDAIITENDAEATRFLAEVDSAIVTHNASTQFADGGEFGFGAEIGIATGRMHARGPVGVEQLTTFKYRVHGTGQI 430          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_CHRSD (Gamma-glutamyl phosphate reductase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=proA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.334e-25
Identity = 54/99 (54.55%), Postives = 72/99 (72.73%), Query Frame = -1
Query:  292 VCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 588
            +  V +VD +  AI HI+ +GS HTD IV E    A  FL +VDS++V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++I+ G+GHV
Sbjct:  328 ILAVRVVDSLEEAIAHINTYGSHHTDAIVTESVTDARRFLAEVDSSSVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSEKYIVYGDGHV 426          
BLAST of CB304959 vs. ExPASy Swiss-Prot
Match: PROA_SYNS3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9311) GN=proA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.354e-25
Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = -1
Query:  250 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV-VDGDQG-VVYTHKNL 591
            +V  V +V D   A++HI  +GS HT+ I   +   AE FL  VDSA V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG GHV  D  +G   ++H++L
Sbjct:  320 LVLAVRVVKDFDEALEHIRMYGSRHTEAIATVNHDTAERFLRAVDSAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGEGHVAADFSEGREQFSHRDL 435          
The following BLAST results are available for this feature:
BLAST of CB304959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_BURP11.146e-2556.70Gamma-glutamyl phosphate reductase OS=Burkholderia... [more]
PROA_BURMA1.146e-2556.70Gamma-glutamyl phosphate reductase OS=Burkholderia... [more]
PROA_METNO1.496e-2556.57Gamma-glutamyl phosphate reductase OS=Methylobacte... [more]
PROA_BURXL1.496e-2555.67Gamma-glutamyl phosphate reductase OS=Burkholderia... [more]
PROA_ACIAD1.954e-2551.52Gamma-glutamyl phosphate reductase OS=Acinetobacte... [more]
PROA_NITOC2.553e-2556.25Gamma-glutamyl phosphate reductase OS=Nitrosococcu... [more]
PROA_PSEU53.334e-2552.53Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_METRJ3.334e-2553.54Gamma-glutamyl phosphate reductase OS=Methylobacte... [more]
PROA_CHRSD3.334e-2554.55Gamma-glutamyl phosphate reductase OS=Chromohaloba... [more]
PROA_SYNS34.354e-2550.86Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_G02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_G02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304959 ID=CB304959; Name=CB304959; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAATTCAAATTCTGAACTT
CATTATTGACTTGAGGAAACTTTCTATTACATGAGGCTCTACCCCAAGCA
AGATCCAAGTAATAAAACTAAAGATCTTAATAAATAACATCAGCAAAGTG
CAATAAATATACACCAAGTAAATAGAGTCTCAGAAGCAGCTACCATAATA
TTATACAAATGACATGGTTTAGAACCATAAGTTACTAGGATTGCAAGGCA
AGATTCTTGTGGGTATAGACGACTCCTTGATCACCATCTACGACGTGTCC
ATTCCCTCTCAATATCCATCGAGTAGTTAGCAATCCTTCAACTCCGACTG
GACCACGAGCATGAATCCTGCTTGTGCTTATTCCAACCTCTGCACCAAGT
CCAAATCGTGCTCCATCACAGAATCGTGTACTTGCATTATGAAATACTGC
AGCACTGTCAACTTGACATAAAAATGTTTCAGCAACTTTTTGATCTTCTG
CAACAATGCAATCAGTATGGGCACTTCCATGTTGATGAATATGGTCAATA
GCAGCACGCACATCGTCCACAATTTCAACCGTACAAACCAT
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