CB304987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 4.795e-29 Identity = 71/166 (42.77%), Postives = 103/166 (62.05%), Query Frame = -2 Query: 38 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKC---NYGAPEPNVSAREALE---LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLL 517 RG+++LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ ++IFS +GKL+E + +M +++Y KC G+ +A+E L+ L + E LK E LQ+ + G G +N +EL LE+ L+ + QIRS + ML + L++KE +L Sbjct: 3 RGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVL 168
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.395e-28 Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = -2 Query: 44 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQ 517 RG++E+KRIEN +RQVTF+KRR GLLKKA+ELSVLCDAEVA+I+FS GKL+EF SS+SM KTL RY + P ++ + + + L LK LQ ++ G+ L L+ KEL+ LE+QL+ SL +R + + L E + KEQ Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF-SSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDL-LKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQ 158
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.380e-28 Identity = 73/164 (44.51%), Postives = 105/164 (64.02%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++ +++I++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN KLY+F +SSS+ T+ER+ N E A E+ Q+E L+ +LQ + R L G EL L+ KEL+++E QL+MSL+ IR R Q + + + EL K L+ E Sbjct: 3 RGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERF---NTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHE 162
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.108e-28 Identity = 68/165 (41.21%), Postives = 107/165 (64.85%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSS--QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++ +KRI+N +NRQVTF+KRR GL+KKA EL++LCDA+V LI+FS G+LY+F SSSSM +ERY++ A E + + + Q+E L+ + + L + R LLGEE+ ++L+ L+ Q++MSL IR+ + Q + + + +L K L+ +E Sbjct: 3 RGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQE----AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKE 162
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 4.059e-28 Identity = 69/163 (42.33%), Postives = 105/163 (64.42%), Query Frame = -2 Query: 32 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYR-KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 517 RG+V+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++GKL+E ++ +M +ERY+ G EP R+ + ++Q L+ + LQR R+ G G + +L +LE+ L++ + QIR+T+ Q M + L++KE +L E Sbjct: 3 RGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQV---AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKE 162
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.181e-27 Identity = 67/165 (40.61%), Postives = 106/165 (64.24%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMVKTLERYRKC-NYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS + S+ + +E+Y+ N E N + LE++ ++K E L+ R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KEQ+L ++ Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMT------RMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQ 161
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.014e-27 Identity = 71/164 (43.29%), Postives = 104/164 (63.41%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS++GKL+E+CS SM + + RY + GA P R L E K++ LQ S + G++L +EL LE+QL+ +L +IR+ + + M + L+ E++L +E Sbjct: 6 RGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTT-GASLPVEDNRVQL----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKE 164
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.014e-27 Identity = 73/158 (46.20%), Postives = 102/158 (64.56%), Query Frame = -2 Query: 44 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQ 517 RG++E+KRIEN +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS GKL+E+ SS+ M +TL RY N+ + + + + E+ LK + LQ L G+ L PL KEL+SLE+QL +L +R + + + + L E + KEQ Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYG--NHQSSSASKAEEDCAEVDI------LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQ 151
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.488e-27 Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 R ++E+KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S GKLY F S ++VK L+RY K + A + L Q + L + YE L+ L+G + ++ L LE L+ +L R+ +T+ ML + L+ KE++L EE Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQH---------ADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEE 156
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.909e-26 Identity = 65/165 (39.39%), Postives = 104/165 (63.03%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLERYRKCNYGAPE-PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIEN +RQVTF+KRR+GL+KK +ELSVLCDA++ LI+FS +GKL E+C+ SM + ++RY K PE N + A +E ++K LQ + + G++L + +EL LE+ LD SL ++R+ + + + + + L+ E +L +E Sbjct: 3 RGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKE 167 The following BLAST results are available for this feature:
BLAST of CB304987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304987 ID=CB304987; Name=CB304987; organism=Citrus sinensis; type=EST; length=518bpback to top |