CB304987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.799e-26 Identity = 65/161 (40.37%), Postives = 99/161 (61.49%), Query Frame = -2 Query: 38 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLL 517 RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ +M + +ERY+ A +A + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L Sbjct: 3 RGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK----SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGML 159
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 3.799e-26 Identity = 65/161 (40.37%), Postives = 99/161 (61.49%), Query Frame = -2 Query: 38 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLL 517 RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ +M + +ERY+ A +A + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L Sbjct: 3 RGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK----SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGML 159
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.962e-26 Identity = 66/163 (40.49%), Postives = 103/163 (63.19%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 R ++++++I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+EFC SSSM + LER+ + + + + E L+L ++ ++ R + GEEL L+ +EL+ LE+ L+ L ++ T++ ++ ++ELQ K L +E Sbjct: 3 REKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFC-SSSMKEVLERHNLQSKNLEKLDQPSLE-LQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDE 163
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.105e-25 Identity = 64/168 (38.10%), Postives = 102/168 (60.71%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQ----EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS + S+ + +E Y+ V+ E++ Q E +++ E L R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KE +L ++ Sbjct: 3 RGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ---------TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQ 161
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.444e-25 Identity = 70/163 (42.94%), Postives = 101/163 (61.96%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIEN NRQVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF SS+S+V L++Y K +A + E K+K + +Q R+L GE++ LN +EL LE LD L IR+ + D L ++ K Q + EE Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQYHKLT------GRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQN----DLLRMMRKKTQSMEEE 154
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.200e-25 Identity = 69/166 (41.57%), Postives = 104/166 (62.65%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIEN NRQVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF SS+S+V L++Y K ++ R L+ + E K+K + +Q R+L GE++ LN +EL LE L+ L IR+ + + L ++ K Q + EE Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQYHK---------LTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQN----EVLRMMRKKTQSMEEE 154
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.165e-25 Identity = 67/168 (39.88%), Postives = 104/168 (61.90%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMVKTLERYRKCN----YGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIEN NRQVT++KRRNG++KKA E++VLCDA+V+LIIF N GK++E+CS S+++ L+ Y+K + + A N+S E ++K + +Q R+L GE++ LN KEL LE L L I + ++ + L ++ +Q+L EE Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLS----------NEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQS----EILRMVRKNDQILEEE 156
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.165e-25 Identity = 69/164 (42.07%), Postives = 101/164 (61.59%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELS-SQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 R R E+KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F +SSSM + +++Y N + + + +L+L+ +Y L + R + GEEL L+ EL+ LE+ L+ L ++ T+ Q ++ ++ELQ K L+EE Sbjct: 3 RERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF-ASSSMNEIIDKY---NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEE 162
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.165e-25 Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLER---YRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 R ++++K+I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+++ SSSSM + LER + K +P++ L+L Y +L R + GEEL LN +EL+ LER L+ L ++ + ++ + +LQ K L EE Sbjct: 3 REKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDY-SSSSMKQILERRDLHSKNLEKLDQPSLE----LQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEE 163
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.556e-24 Identity = 68/167 (40.72%), Postives = 99/167 (59.28%), Query Frame = -2 Query: 59 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMVKTLERYR----KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQI---------RSTRTQYMLDTLTEL 517 RG++E+KRIEN NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ GKLY++CS +S+ + LE+Y+ K + ++SA E ++K + +Q R+L GE+L L KEL +E LD + + R RT ML+ +L Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKL 159 The following BLAST results are available for this feature:
BLAST of CB304987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304987 ID=CB304987; Name=CB304987; organism=Citrus sinensis; type=EST; length=518bpback to top |