CB304990

Overview
NameCB304990
Unique NameCB304990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.828e-15
Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = -2
Query:  317 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 643
            AVVKE                  D ++ GF +P  +++ VN W +  + + W NP  F PERFL   A  +  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  359 AVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.828e-15
Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = -2
Query:  239 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGS--NADFKG-QNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHA 643
            AVVKE                 + V++AG+ +P    V   V  I  D + W +P  F P+RFL    +AD  G +  +++PFG GRRICPGL +A   ++LML  ++  F+W     N+ +D  +K   TV    PL A
Sbjct:  354 AVVKELLRKHPPTYFTLTHSVTEPVKLAGYDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGREDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPLRA 493          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15
Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = -2
Query:  317 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 643
            AV+KE                  D ++AG+ +P  +++ VN W +  + + W+ P  F PERFL   S  +  G +F+ IPFG GRR CPG+ LA+ +L +++G L+ +F+
Sbjct:  360 AVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFE 470          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 8.230e-15
Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = -2
Query:  317 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 643
            AV+KE                  D +++GF +P  +++ VN W +  + + W  P  F PERFL   S+ +  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  358 AVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 468          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14
Identity = 49/140 (35.00%), Postives = 65/140 (46.43%), Query Frame = -2
Query:  239 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSNADFKG-QNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHA 643
            AVVKE                 +   + G+ +P  A V V   AI  D   W NP  F PERF+  G  AD  G    +++PFG GRRICPGL +A   +HLM+  ++  F+W        MD   K+  TV   + L A
Sbjct:  362 AVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPIDANVEVYTPAIAEDPKNWLNPEKFDPERFISGGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEWGAYPPEKKMDFTGKWEFTVVMKESLRA 501          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.404e-14
Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = -2
Query:  317 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 643
            AV+KE                  D ++AG+ +P  +++ VN W +  + + W +P  F PERFL   S  +  G +F  IPFG GRR CPG+ LA+ +L + +G ++ +F+
Sbjct:  359 AVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFE 469          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.833e-14
Identity = 37/111 (33.33%), Postives = 59/111 (53.15%), Query Frame = -2
Query:  317 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 643
            AV+KE                  D ++ G+ +P  +++ VN W +  + + W  P  F PERFL   S+ +  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  359 AVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.394e-14
Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = -2
Query:  317 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 643
            AV+KE                  D ++ GF +P  +++ VN W +  + + W  P  F PERFL   A  +  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+
Sbjct:  359 AVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.394e-14
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = -2
Query:  317 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 643
            AVVKE                  D ++ GF +P  +++ VN W +  +   W  P  F PERFL   A  +  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+
Sbjct:  359 AVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.394e-14
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -2
Query:  317 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 643
            AVVKE                  D ++AG+ +P  +++ VN W +  + ++W  P  F PERF    S+ +  G +F  +PFG GRR CPG+ LA+ +L + +G ++ +F+
Sbjct:  359 AVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFE 469          
The following BLAST results are available for this feature:
BLAST of CB304990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
TCMO_POPTM2.828e-1536.04Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C77A1_SOLME2.828e-1534.29Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
TCMO_PETCR4.825e-1534.23Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_CICAR8.230e-1534.23Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C77A3_SOYBN1.075e-1435.00Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
TCMO_RUTGR1.404e-1433.33Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_GLYEC1.833e-1433.33Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_PEA2.394e-1433.33Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_HELTU2.394e-1434.23Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_ARATH2.394e-1432.43Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304990 ID=CB304990; Name=CB304990; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGCTATTAAATCGCATGA
CTTTATAGTTTATTGAAGATTAACTCCGTTAAGTTGCGTGTCTACATAAA
AAAAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTA
ACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGG
CTACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGG
TTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGT
GGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGA
TGTAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGC
TCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACC
CTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCA
TCTCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCAC
TGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATA
AGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCT
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