CB304990

Overview
NameCB304990
Unique NameCB304990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.015e-25
Identity = 54/140 (38.57%), Postives = 85/140 (60.71%), Query Frame = -2
Query:  227 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAVPGA 643
            AVVKE                 +DV +    +P G QV VN+WA+GR+ +TW  + + F PER L S +DF+GQ+FELIPFGAGRR+CPG+  A+ +  ++L +L++ FDW+  +   D+ +  G  +++  PL+ +P +
Sbjct:  342 AVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDETDVAESIGSVIRRMHPLYVIPSS 481          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.938e-25
Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = -2
Query:  233 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 571
            +++ G+ +P   ++ VNV AIGRD   W NP  F PERF+ S+ D++GQ++EL+PFG+GRRICPG+P+ I  + L L +L+  FDWKL     + ++D E+   LT+ K  PL  VP
Sbjct:  382 IKVQGYDIPPKRRILVNVSAIGRDPKLWTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLQLVP 498          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.717e-25
Identity = 52/115 (45.22%), Postives = 76/115 (66.09%), Query Frame = -2
Query:  233 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 571
            ++I G+ +P    + VNVW+IGRD   W NP  F PERF+    D+KG +FE++PFG+GRRICPG+  AI  + L L +L+  FDW+L  ++ ++DME+   +T+ K  PL  VP
Sbjct:  380 IKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPEEDKDLDMEEAGDVTIIKKVPLKLVP 494          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24
Identity = 50/118 (42.37%), Postives = 78/118 (66.10%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            D++I G+ +PK   + +N ++IGRD + W+NP+ F PERF+ S  ++KGQ++EL+PFGAGRRICPG+   I ++ L L +++  FDW L +     ++DME+     V K  PL  +P
Sbjct:  378 DLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFIDSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEEAGAFVVAKKVPLELIP 495          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.496e-24
Identity = 52/117 (44.44%), Postives = 78/117 (66.67%), Query Frame = -2
Query:  233 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK----LDNHNMDMEDKFGLTVQKAQPLHAVP 571
            +++ G+ +P   ++ VN WAIGRD + W NP  F PERF+ +  D++GQ+FEL+PFG+GRRICPG+ L I ++ L L +L+  FDW+    + + ++D E+   LTV K  PL  VP
Sbjct:  382 IKVQGYDIPPKRRILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHKDIDTEEAGILTVVKKVPLKLVP 498          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24
Identity = 54/118 (45.76%), Postives = 72/118 (61.02%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            D  I G+ VP   +VFVN WAIGRD ++W  P  F P+RF+GS+ D+ G +FELIPFGAGRRICPGL +    +   L +L+  +DW L       ++ ME+   LT  +  PL  VP
Sbjct:  405 DTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHRKTPLVVVP 522          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24
Identity = 52/118 (44.07%), Postives = 76/118 (64.41%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            DV+I G+ +PK   + +N +AIGRD + W NP+ FIPERF+ S  D+KGQ+FEL+PFG GRRICPG+   + ++ L L +++  FDW L       +++ME+     + K  PL  VP
Sbjct:  378 DVKIQGYNIPKNTMIEINTYAIGRDPNCWTNPNEFIPERFVDSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADINMEEAGAFVIAKKVPLELVP 495          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24
Identity = 53/117 (45.30%), Postives = 77/117 (65.81%), Query Frame = -2
Query:  233 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 571
            +++ G+ +P   ++ VNV AIGRD   W NP  F PERF+ S  D++GQ++EL+PFG+GRRICPG+P+ I  + L L +L+  FDWKL     + ++D E+   LT+ K  PL  VP
Sbjct:  382 IKVQGYDIPPKRRILVNVSAIGRDPKLWTNPKEFDPERFMDSFVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLKLVP 498          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = -2
Query:  236 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHN----MDMEDKFGLTVQKAQPLHAV 643
            AV+KE                 +DV++  + +P G QV +N WAIGR+ +TW  +   F PER L ++ DF+GQNFEL+PFGAGRRICP +  A+ +  ++L +L++ FDWKL   +     D+ +  G +V +  PL+AV
Sbjct:  344 AVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKEDKTDVAESSGFSVHREFPLYAV 484          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = -2
Query:  233 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 568
            +I G+ +P   ++ +N WAIGR+   W    +F PERFL S+ DF+G +FE IPFGAGRRICPG+  AI  + L L  L+  FDWKL     N  +DM +  G+T+++   L  +P
Sbjct:  390 QINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIP 505          
The following BLAST results are available for this feature:
BLAST of CB304990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C71AN_ARATH3.015e-2538.57Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH3.938e-2545.30Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH6.717e-2545.22Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH1.146e-2442.37Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH1.496e-2444.44Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI1.954e-2445.764-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BL_ARATH1.954e-2444.07Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH1.954e-2445.30Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH1.954e-2439.72Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71DA_SOYBN2.552e-2443.97Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304990 ID=CB304990; Name=CB304990; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGCTATTAAATCGCATGA
CTTTATAGTTTATTGAAGATTAACTCCGTTAAGTTGCGTGTCTACATAAA
AAAAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTA
ACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGG
CTACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGG
TTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGT
GGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGA
TGTAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGC
TCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACC
CTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCA
TCTCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCAC
TGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATA
AGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCT
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