CB304990

Overview
NameCB304990
Unique NameCB304990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.813e-23
Identity = 52/118 (44.07%), Postives = 73/118 (61.86%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 574
            + E+ G+T+P  A++ +NVW++GR+   W+ P TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL    +  +MDM +  GLT  +   L  VP
Sbjct:  376 ECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLTGIRKNNLLLVP 493          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.813e-23
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 574
            D EI G+ VP G +V V+ WA+GRD +TW+ P  F+PERF+      +   KG++   IPFG+GRRICPG+      + +ML +L+  FDW++      + ME+ FGLT+++ + L  VP
Sbjct:  413 DSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGAGVSMEESFGLTLRRKEKLLLVP 532          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.813e-23
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = -2
Query:  308 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 574
            DV I G+ +P   +VF+N WAIGRD  +W+N   F+PERF+ ++ DFKGQ+F+LIPFGAGRR CPG+   I  + + L +L+  F+W+L
Sbjct:  380 DVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWEL 468          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.287e-23
Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = -2
Query:  236 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAV 574
            + EI G+T+P   +V VNVWA+GRD   WD+  +F PERF   + DF G NFE +PFG GRRICPG+   +  ++L L  L+  FDWKL    +  ++D+ +  G+T  +   L+ +
Sbjct:  378 ETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLI 494          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.211e-23
Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = -2
Query:  224 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVPGAI 568
            EI G+ +P  ++V VN WAIGRD   W     F PERF+  + ++K  +FE IPFGAGRR+CPGL   +  +  +L  L+  FDWKL     N ++ M + FG+TV +   L+ +P  +
Sbjct:  376 EINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLIPKTV 494          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.072e-22
Identity = 53/144 (36.81%), Postives = 82/144 (56.94%), Query Frame = -2
Query:  227 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVPGA 643
            AV+KE                 +DV++ G+ +P G QV VN WAI RD +TW  +   F PER L +N DF+GQ+F+ IPFG+G+RICPG+     ++ + L +++  F+W++D        D+ +  GL V +  PL A+P +
Sbjct:  353 AVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIPSS 496          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.401e-22
Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = -2
Query:  233 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAVP 568
            +I G+ +  G ++ VN WAIGR+   W +P  FIPERF+ SN + KG +FEL+PFG+GRR CP + + +  +   L +L+  FDWK     + +E+  GLT  +  PLH VP
Sbjct:  385 KIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKA-TEEVSVEEAPGLTSHRKHPLHLVP 495          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.389e-22
Identity = 50/118 (42.37%), Postives = 73/118 (61.86%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            + +I G+T+    ++ VNVWAIGRD   W +P  F+PERF+  + D KGQ++EL+PFG+GRRICP + + I  +   L +L+  FDWKL       ++ M++  GLT  K   L  VP
Sbjct:  380 EFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASGLTSHKKHDLLLVP 497          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.389e-22
Identity = 54/141 (38.30%), Postives = 79/141 (56.03%), Query Frame = -2
Query:  236 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFT-VPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAV 643
            AV+KE                 +DV++ G+  +P   Q  +NVWAIGRD  +W+NP  F PERFL ++ D KG  FEL+PFG+GRR CPG   AI ++ L L  L++ F++ L       ++DM +  G+  ++  PL  V
Sbjct:  361 AVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRRKSPLPVV 501          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.120e-22
Identity = 51/118 (43.22%), Postives = 71/118 (60.17%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            + E+ G+ +P  A++ +NVW++GR+   W+ P TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL       +MDM +  GLT  +   L  VP
Sbjct:  373 ECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVP 490          
The following BLAST results are available for this feature:
BLAST of CB304990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C71DD_MENPI4.813e-2344.07Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71C2_MAIZE4.813e-2341.67Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71A1_PERAE4.813e-2350.56Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71D7_SOLCH6.287e-2341.88Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71D9_SOYBN8.211e-2341.18Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71AK_ARATH1.072e-2236.81Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH1.401e-2242.86Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71BA_ARATH2.389e-2242.37Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME2.389e-2238.30Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C7D95_MENSP3.120e-2243.22Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304990 ID=CB304990; Name=CB304990; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGCTATTAAATCGCATGA
CTTTATAGTTTATTGAAGATTAACTCCGTTAAGTTGCGTGTCTACATAAA
AAAAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTA
ACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGG
CTACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGG
TTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGT
GGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGA
TGTAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGC
TCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACC
CTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCA
TCTCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCAC
TGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATA
AGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCT
back to top