CB304990

Overview
NameCB304990
Unique NameCB304990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.641e-21
Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = -2
Query:  308 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 571
            V+I G+ +P   Q+ +NV+AI RD   W NP  F P+RFL S+ D+KG NFEL+PFG+GRRICPG+ + I ++   L +L+  FDW L
Sbjct:  378 VKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGL 465          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.505e-21
Identity = 47/117 (40.17%), Postives = 74/117 (63.25%), Query Frame = -2
Query:  233 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 571
            V+I G+ +P   Q+ +N+++I RD   W NP  F P+RFL S+ D++G NFEL+PFG+GRRICPG+ L I  + L L +L+  FDW +    +  ++++E+   + + K   L  VP
Sbjct:  384 VKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELVP 500          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.685e-21
Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = -2
Query:  233 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNA----DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 568
            ++ GF V KG +V VN WA+ R    W +P  F PERF    GS+A    D++G  FE IPFG+GRR+CPG    +  L LM+  L+  FDW L +      +DM+   G T+++   LH VP
Sbjct:  385 DVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLVP 507          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.685e-21
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = -2
Query:  236 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAV 574
            + EI G+T+P   +V VNVWA+GRD   WD+   F PERF   + DF G NFE +PFG GRRICPG    +   +L L  L+  FDWKL    +  ++D+ +  G++      L+ +
Sbjct:  379 ETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMSAASKDDLYLI 495          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.685e-21
Identity = 43/88 (48.86%), Postives = 62/88 (70.45%), Query Frame = -2
Query:  308 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 571
            ++I G+ VP   Q+ VNV+A+GRD   W+N   F P+RFL S+ DFKG+N+E IPFG+GRRICPG+ +   ++ + L +L+  FDW L
Sbjct:  378 IKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGL 465          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.685e-21
Identity = 50/145 (34.48%), Postives = 79/145 (54.48%), Query Frame = -2
Query:  224 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVPGAI 643
            AV+KE                 +DV++ G+ +  G +V +N WAI RD + W  +   F PER L S  D+ G++   IPFG+GRRICPG+ LA+ ++ + + +L+  FDW+ +        D+ + FGL V +  PL A P ++
Sbjct:  352 AVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPLIAFPSSV 496          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20
Identity = 50/139 (35.97%), Postives = 77/139 (55.40%), Query Frame = -2
Query:  236 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADF--KGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD-WKLDNHNMDMEDKFGLTVQKAQPLHAV 643
            AVVKE                 +D  + G+ V KG ++  N+W I  D + W +P  F P+RFL ++ D   KG +F+L+PFG+GRR+CPG+   ++ +HL L S ++SF+        +DM + FG+T  KA PL  +
Sbjct:  374 AVVKETLRLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLEVL 512          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20
Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = -2
Query:  227 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN----ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVPGA 568
            E+AG+T+P   +V VN WA+GR    W+  + F+PERFL  +     D K   F+ + FG+GRR+CPG+  A   +  ML +L+  FDW+L       ++DM + FG+TV + + L  VP A
Sbjct:  416 EVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVPQA 537          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.311e-20
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = -2
Query:  308 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 571
            V+I G+ +P   Q+ +N +AI RD   W NP  F P+RFL S+ D++G NFEL+PFG+GRRICPG+ + I ++ L L +L+  FDW L
Sbjct:  378 VKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGL 465          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.236e-20
Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = -2
Query:  245 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD-WKLDNHNMDMEDKFGLTVQKAQPL 565
            + G+ + KG ++  N+W I RD S W +P  F PERFL ++   D +G NFEL+PFG+GRR+C G+ L + M+H  L +L++SFD        +DM + FG T  KA PL
Sbjct:  402 LGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFGFTNTKATPL 511          
The following BLAST results are available for this feature:
BLAST of CB304990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C71BT_ARATH2.641e-2150.00Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH4.505e-2140.17Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C99A1_SORBI7.685e-2141.46Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71D6_SOLCH7.685e-2141.03Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BF_ARATH7.685e-2148.86Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH7.685e-2134.48Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C82A4_SOYBN1.004e-2035.97Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C71C4_MAIZE1.004e-2039.34Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BS_ARATH1.311e-2048.86Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C82A3_SOYBN2.236e-2043.64Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304990 ID=CB304990; Name=CB304990; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGCTATTAAATCGCATGA
CTTTATAGTTTATTGAAGATTAACTCCGTTAAGTTGCGTGTCTACATAAA
AAAAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTA
ACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGG
CTACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGG
TTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGT
GGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGA
TGTAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGC
TCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACC
CTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCA
TCTCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCAC
TGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATA
AGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCT
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