CB305000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_KUNPU (Maturase K OS=Kunzea pulchella GN=matK PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 87/129 (67.44%), Postives = 101/129 (78.29%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWK YLV LWQ HF QPGR+ +N L KY+++FLGY S VRLNS +VRSQMLEN FLI+N+MKK +T VPII LIGSL K+ FCN GHPISK T + SDS +IDRF+RICRNLSHY+SGS Sbjct: 291 LMNKWKCYLVNLWQYHFSVWFQPGRIDINRLC--KYSLDFLGYRSSVRLNSSVVRSQMLENLFLINNAMKKFETIVPIIPLIGSLYKSNFCNTFGHPISKPTRTHSSDSDIIDRFLRICRNLSHYHSGS 417
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_FRAVE (Maturase K OS=Fragaria vesca GN=matK PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 83/129 (64.34%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV WQ HF SQPGR+ LN L K++ +FLGYLS +R N +VRSQ+LEN++L+ N+MKK++T PII +IGSL K +FCN LGHPISKS+W+D SDS +IDRFVRI N+SHYYSGS Sbjct: 288 LMNKWKYYLVNFWQCHFYVWSQPGRIHLNQL--SKHSFDFLGYLSSIRPNISVVRSQLLENTYLMYNAMKKLNTLFPIIPMIGSLAKVKFCNTLGHPISKSSWADSSDSDIIDRFVRIVGNISHYYSGS 414
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_CUBDO (Maturase K OS=Cubanola domingensis GN=matK PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV WQ +F GRV +N L + +NF+GYLS VRLN +VRSQMLENSFLI+N++KK+DT VPII LIGSL KA+FCN LGHPISK W+ SDS +IDRF +ICRNLSHY+SGS Sbjct: 293 LMNKWKYYLVNFWQCYFDLWVHSGRVYINQL--PNHTLNFIGYLSSVRLNPSMVRSQMLENSFLINNAIKKLDTLVPIIPLIGSLAKAKFCNLLGHPISKPAWAGLSDSDIIDRFGQICRNLSHYHSGS 419
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_SAXIN (Maturase K OS=Saxifraga integrifolia GN=matK PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.533e-43 Identity = 84/129 (65.12%), Postives = 101/129 (78.29%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+NKWKYYLV WQ +F SQPGR+ +N L K ++NFLGYLS VRLN VRSQMLENSF++DN++KK D VPII LI SL KA+FCN +G PISK W+D SDS++IDRFVRICRN+ HY+SGS Sbjct: 296 LLNKWKYYLVNFWQCNFYLWSQPGRIHINQL--SKNSLNFLGYLSSVRLNPSAVRSQMLENSFIMDNAIKKFDIIVPIIPLIRSLAKAKFCNLVGDPISKPAWADSSDSYIIDRFVRICRNIYHYHSGS 422
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_NICOT (Maturase K OS=Nicotiana otophora GN=matK PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.533e-43 Identity = 85/129 (65.89%), Postives = 97/129 (75.19%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWK+YLV WQ HF GR+ +N L + +F+GYLS VRLN +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC LGHPISK WSD SDS++IDRF RICRNL HYYSGS Sbjct: 297 LMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNDSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSYIIDRFGRICRNLFHYYSGS 423
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_FROFL (Maturase K OS=Froelichia floridana GN=matK PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.533e-43 Identity = 81/129 (62.79%), Postives = 99/129 (76.74%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM+KWKYY + WQ +F SQP R+ +N L Y+++F+G+LS VR NS ++RSQMLENSFL++N KK DT VPI L+GSL KA+FCN LGHPI KS W+D SDS +IDRF RICRNLSHYYSGS Sbjct: 293 LMHKWKYYFIYFWQCYFSVWSQPRRIYINQL--SNYSLDFMGFLSNVRFNSSVIRSQMLENSFLLENIRKKFDTIVPISPLVGSLAKAKFCNVLGHPIGKSVWTDLSDSDIIDRFGRICRNLSHYYSGS 419
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_CHOSU (Maturase K OS=Choricarpia subargentea GN=matK PE=3 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 2.533e-43 Identity = 87/129 (67.44%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV LWQ HF A QPGR+ +N L Y+++FLGY S VRLNS +V QML+N FLI+N+MK +T VPII LIGSL+KA FCN LGHPISK T SD SDS +I+RF+RICRNLSHY+SGS Sbjct: 291 LMNKWKYYLVNLWQYHFYAWFQPGRININQLCX--YSLDFLGYRSSVRLNSSVVXXQMLKNLFLINNAMKXFETIVPIIPLIGSLSKANFCNTLGHPISKPTRSDSSDSDIINRFLRICRNLSHYHSGS 417
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_CERSL (Maturase K OS=Ceratonia siliqua GN=matK PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.533e-43 Identity = 82/128 (64.06%), Postives = 100/128 (78.12%), Query Frame = -1 Query: 33 MNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 416 MNKWKYYL+ LWQ +F SQPG++ +N L +++ FLGY S VRLN +VRSQMLENSF+I+N MKK+DT +PII LI SL K +FCN LGHPISK W+D SD +IDRF+RICRNLSHYY+GS Sbjct: 293 MNKWKYYLIHLWQCNFYVWSQPGKIHINQL--SEHSFYFLGYFSNVRLNPSVVRSQMLENSFIIENVMKKLDTIIPIIPLIRSLAKVKFCNGLGHPISKPVWADSSDFDIIDRFLRICRNLSHYYNGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_AUCJA (Maturase K OS=Aucuba japonica GN=matK PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.533e-43 Identity = 84/129 (65.12%), Postives = 99/129 (76.74%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYL+ WQ HF S PGR+ +N L ++ +F+GY S VRLN +VRSQMLENSFLIDN++KK DT VPII LIGSL KA+FCN LG+PISK +D SDS +IDRF RICRN SHY+SGS Sbjct: 292 LMNKWKYYLINFWQCHFYLWSHPGRIYINQL--SNHSFDFMGYFSSVRLNPSMVRSQMLENSFLIDNAIKKFDTIVPIIPLIGSLAKAKFCNVLGYPISKPVRADLSDSDIIDRFGRICRNFSHYHSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_PARAU (Maturase K OS=Parkinsonia aculeata GN=matK PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.308e-43 Identity = 82/129 (63.57%), Postives = 100/129 (77.52%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKYYL+ LWQ HF SQPG++ +N L +++ FLGY S VRLN +VRSQMLENSF+I+N MKK+DT +PII +I SL KARFCN LGHPISK W+D SD +IDRF+ IC+NLSHYY+GS Sbjct: 292 LMKKWKYYLIHLWQCHFFVWSQPGKIHINQL--SEHSFYFLGYFSNVRLNPSVVRSQMLENSFIIENVMKKLDTIIPIIPIIRSLAKARFCNVLGHPISKPVWADSSDFDIIDRFLLICKNLSHYYNGS 418 The following BLAST results are available for this feature:
BLAST of CB305000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305000 ID=CB305000; Name=CB305000; organism=Citrus sinensis; type=EST; length=419bpback to top |