CB305000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_TRACE (Maturase K OS=Trachelium caeruleum GN=matK PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.296e-36 Identity = 72/129 (55.81%), Postives = 90/129 (69.77%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 +MNKW YY V WQ +F SQP R+ +N L ++++FL Y S VR + VR+QML FL DN++ K DT VPII +IGSL K++FCN GHPISK+ W D SDS +IDRF RI RNLSHY+SGS Sbjct: 302 VMNKWNYYFVNFWQSYFYLWSQPRRIHINQL--SNHSLDFLAYFSSVRRRTSTVRNQMLSKLFLSDNAINKFDTFVPIIPMIGSLAKSKFCNRAGHPISKAVWLDLSDSDIIDRFGRIARNLSHYHSGS 428
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_SPIPO (Maturase K OS=Spirodela polyrrhiza GN=matK PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.296e-36 Identity = 76/129 (58.91%), Postives = 89/129 (68.99%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWK Y V LWQ HF SQP R+ +N ++ FLGYLS V N V +QMLENSFLI+ KK +T V II +IGSL+KA+FCN G+PISK W+D SD +IDRF RICRNLSHYYSGS Sbjct: 298 LMKKWKSYFVNLWQCHFHFWSQPSRIHINQF--SHFSFYFLGYLSSVPRNRSSVTTQMLENSFLIETVTKKFETMVSIIPMIGSLSKAKFCNLSGNPISKPVWADLSDLDIIDRFGRICRNLSHYYSGS 424
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_DISSE (Maturase K OS=Disporum sessile GN=matK PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 2.296e-36 Identity = 73/129 (56.59%), Postives = 93/129 (72.09%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWK YLV WQ +F S P R+Q+N L ++ FLGYLS V +N L V+++ML++SFLID KK DT +P+I LIGSL+KA+FC G+P SK+ W+D SDS ++ RF RICRNLSHYYSGS Sbjct: 299 LMKKWKCYLVNFWQYYFHFLSYPYRIQINQLK--NHSFFFLGYLSSVLINPLAVKNKMLDHSFLIDTVTKKFDTTIPVIPLIGSLSKAKFCTVSGYPSSKTIWADLSDSDIVGRFGRICRNLSHYYSGS 425
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_PILTE (Maturase K OS=Pillansia templemannii GN=matK PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.999e-36 Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKY V LWQ +F Q R+ +N L K++ +FLGYLS + NS VR+QML+NSFLID K DTAVP+I LI SL+KA+FC GHPISK W+D SDS +I+RF RICRNLSHY+SGS Sbjct: 309 LMKKWKYNFVNLWQYYFHFWYQSYRIHINQL--SKHSFHFLGYLSSLLKNSSTVRNQMLDNSFLIDTLTTKFDTAVPVIFLIVSLSKAQFCTVSGHPISKPIWTDLSDSGIIERFGRICRNLSHYHSGS 435
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_HELBU (Maturase K OS=Helonias bullata GN=matK PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.999e-36 Identity = 72/129 (55.81%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+ KWK YLV WQ + S+P R+ +N L Y+ F+GY+S V +N V++QMLEN FL+D KK DT VP+I LIGSL+KA+FC GHPISK W+D SDS +I+RF RICRNLSHY+SGS Sbjct: 299 LIKKWKCYLVNFWQYYLYFWSKPYRIHINQL--SNYSFYFMGYISSVLINPSAVKNQMLENLFLVDTVTKKFDTIVPVIPLIGSLSKAKFCTVAGHPISKPVWADLSDSDIIERFGRICRNLSHYHSGS 425
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_TRIUN (Maturase K OS=Trillium undulatum GN=matK PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.917e-36 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+ KWK YLV WQ +F S+P R+ +N Y+ FLGY+S V +N V++QMLEN +L+D +K DT VP+I LIGSL+KA+FC LGHPISK W++ SDS +IDRF RICRNLSHY+SGS Sbjct: 299 LIKKWKCYLVNFWQYYFHFWSKPYRIHINPF--SNYSFYFLGYISSVLINPSAVKNQMLENFYLVDTLTQKFDTIVPVIPLIGSLSKAKFCTILGHPISKPIWAELSDSDIIDRFGRICRNLSHYHSGS 425
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_ANOMA (Maturase K OS=Anomochloa marantoidea GN=matK PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.917e-36 Identity = 75/129 (58.14%), Postives = 89/129 (68.99%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWK YL WQ +F QP R+Q L +FLGYLS V N L+VR+QMLEN+FLID +KK+DT VP I LIGSL+KA+FC GHPISK W+D SD ++DRF RICRN+ HYYSGS Sbjct: 297 LMKKWKCYLANFWQYYFHFWIQPRRIQQKPL--ANSCFDFLGYLSSVTRNPLVVRNQMLENAFLIDTRIKKLDTIVPAISLIGSLSKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNIFHYYSGS 423
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_WOLGL (Maturase K OS=Wolffiella gladiata GN=matK PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.115e-36 Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+ KWK Y + LWQ HF SQP R+ +N ++ FLGYLS V +N ++SQMLENSFLID K T + II +IGSL +A+FCN G+PISK W+D SDS +IDRF R+CRN+SHYYSGS Sbjct: 300 LLKKWKSYFLNLWQCHFHFWSQPSRIHINQF--AHFSFYFLGYLSSVEMNPSSMKSQMLENSFLIDTVTPKFQTLIAIIPMIGSLARAKFCNLSGNPISKPVWTDLSDSEIIDRFGRLCRNISHYYSGS 426
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_TRIPU (Maturase K OS=Trillium pusillum GN=matK PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.115e-36 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+ KWK YLV WQ +F S+P R+ +N Y+ FLGY+S V +N V++QMLEN +L+D +K DT VP+I LIGSL+KA+FC LGHPISK W++ SDS +IDRF RICRNLSHY+SGS Sbjct: 299 LIKKWKCYLVNFWQYNFHFWSKPYRIHINPF--SNYSFYFLGYISSVLINPSAVKNQMLENFYLVDTLTQKFDTIVPVIPLIGSLSKAKFCTILGHPISKPIWAELSDSDIIDRFGRICRNLSHYHSGS 425
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_TRIMC (Maturase K OS=Trillium maculatum GN=matK PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.115e-36 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+ KWK YLV WQ +F S+P R+ +N Y+ FLGY+S V +N V++QMLEN +L+D +K DT VP+I LIGSL+KA+FC LGHPISK W++ SDS +IDRF RICRNLSHY+SGS Sbjct: 301 LIKKWKCYLVNFWQYNFHFWSKPYRIHINPF--SNYSFYFLGYISSVLINPSAVKNQMLENFYLVDTLTQKFDTIVPVIPLIGSLSKAKFCTILGHPISKPIWAELSDSDIIDRFGRICRNLSHYHSGS 427 The following BLAST results are available for this feature:
BLAST of CB305000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305000 ID=CB305000; Name=CB305000; organism=Citrus sinensis; type=EST; length=419bpback to top |