CB305001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPW (Triosephosphate isomerase OS=Pseudomonas putida (strain W619) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.221e-27 Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 + C+GETLE+RE+G T+ VV Q ++ + I+ + N V+AYEPVWAIGTG A+P QAQ+VHA +RK L AEVA + +++YGGSV AN EL PD+DG L+GGASL + Sbjct: 124 VLCIGETLEEREAGKTLEVVGRQLSSVIDAFGIAAFANAVIAYEPVWAIGTGLTASPQQAQDVHAAIRKQLAAK-DAEVAQNVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNAD 240
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_PSEE4 (Triosephosphate isomerase OS=Pseudomonas entomophila (strain L48) GN=tpiA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.207e-27 Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 + C+GETL +RE+G T+ VV Q ++ + I + N V+AYEPVWAIGTG A+P QAQ+VHA +RK L + AEVAA+ +++YGGSV AN EL PD+DG L+GGASL + Sbjct: 124 VLCIGETLAEREAGETLKVVGRQLSSVIDAFGIKAFANAVIAYEPVWAIGTGLTASPQQAQDVHAAIRKQLA-AMDAEVAANVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNAD 240
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_OCEIH (Triosephosphate isomerase OS=Oceanobacillus iheyensis GN=tpiA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.207e-27 Identity = 65/118 (55.08%), Postives = 78/118 (66.10%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 I CVGETL+QRE+ T+ +V EQ K ++N ++AYEPVWAIGTGK AT QA EV E+RK + + SA+VA I YGGSV AN EL AQ D+DG LVGGASL PE Sbjct: 124 IVCVGETLDQREANETMNIVGEQVKQAVAGLTNEQVAETIIAYEPVWAIGTGKTATSEQANEVCTEIRKVVAEVTSADVAEKVIIQYGGSVKPANVDELLAQSDIDGALVGGASLDPE 241
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4) HSP 1 Score: 121.324 bits (303), Expect = 4.207e-27 Identity = 66/119 (55.46%), Postives = 78/119 (65.55%), Query Frame = -3 Query: 293 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEF 643 I CVGETLE+RE G T VV +Q + + + VV+AYEPVWAIGTG+VATP QAQEVHA +RK L + E A S RI+YGGS+ N L Q D+DG LVGGASLK F Sbjct: 524 ILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLKESF 642
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_VIBSA (Triosephosphate isomerase OS=Vibrio sp. (strain ANT-300) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.495e-27 Identity = 64/115 (55.65%), Postives = 79/115 (68.70%), Query Frame = -3 Query: 305 IACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 643 + C+GETLEQ E+G T AVV Q +A+ K I++ +N V+ YEPVWAIGTGK ATP AQE+ A +R WL + A VA +I+YGGSV AN EL Q D+DG LVGGASL Sbjct: 124 VLCIGETLEQFEAGETKAVVEAQLQAVVTKSGITSLNNAVIGYEPVWAIGTGKTATPEIAQEIPAHIRSWLAEQ-DAAVANKVQILYGGSVKPANSAELFGQADIDGGLVGGASL 237
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPK (Triosephosphate isomerase OS=Pseudomonas putida (strain KT2440) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.495e-27 Identity = 62/118 (52.54%), Postives = 80/118 (67.80%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 + C+GETLE+RE+G T+ VV Q +I E + + + V+AYEPVWAIGTG ATP QAQ+VHA +R L AEVAA +++YGGSV AN EL PD+DG L+GGASL + Sbjct: 124 VLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAE-DAEVAAKVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNAD 240
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_PSEP1 (Triosephosphate isomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.495e-27 Identity = 62/118 (52.54%), Postives = 80/118 (67.80%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 + C+GETLE+RE+G T+ VV Q +I E + + + V+AYEPVWAIGTG ATP QAQ+VHA +R L AEVAA +++YGGSV AN EL PD+DG L+GGASL + Sbjct: 124 VLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAE-DAEVAAKVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNAD 240
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.495e-27 Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = -3 Query: 302 IACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 643 I C+GE LE+RE+ VVA Q ++ + ++ +VLAYEPVWAIGTGK A+PAQAQE+HA +R + + E+A +T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 125 IFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_BACFN (Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.495e-27 Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = -3 Query: 302 IACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 643 I C+GE LE+RE+ VVA Q ++ + ++ +VLAYEPVWAIGTGK A+PAQAQE+HA +R + + E+A +T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 125 IFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_HALHL (Triosephosphate isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.176e-27 Identity = 59/118 (50.00%), Postives = 82/118 (69.49%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 I CVGETL +R++ T +VV EQ A+ + + + + V+AYEPVWAIGTG+ ATP QAQ VHA +R+ +++ + E+A I+YGGS+ N EL AQPD+DG L+GGASL P+ Sbjct: 120 ILCVGETLAERDAERTESVVGEQLDAVMDAVGGATFQGAVIAYEPVWAIGTGRTATPEQAQAVHAFIRQRVQERDAGEIADQLPILYGGSMKADNAAELLAQPDIDGGLIGGASLDPD 237 The following BLAST results are available for this feature:
BLAST of CB305001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305001 ID=CB305001; Name=CB305001; organism=Citrus sinensis; type=EST; length=645bpback to top |