CB305043
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTB_SYNY3 (Phytoene synthase OS=Synechocystis sp. (strain PCC 6803) GN=crtB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.777e-41 Identity = 87/169 (51.48%), Postives = 119/169 (70.41%), Query Frame = -1 Query: 158 LYCYYVAGTVGLMSVPVMGI-APDSQAT--TESVY---NAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNTWRNSMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPIAYAKS 646 LYCY VAGTVGLMS V+G+ + QA ++VY A+ALG+ANQLTNILRDVGED +RGR+YLP ++L + S+ D+ G + WR+ MK +I RAR +F+ AE G+ L+ +RWPVW +L+LY+ ILD IEAN+YN F +RAYV KK+ LP+A+ ++ Sbjct: 166 LYCYRVAGTVGLMSSAVLGVDTGNGQAPWQPDAVYIPQEEAIALGVANQLTNILRDVGEDVERGRIYLPLEDLERFNYSEQDLLNGVNDDRWRSLMKFEIDRARHYFEDAERGIRALNRDARWPVWTALMLYKGILDVIEANNYNVFNRRAYVPTPKKLLYLPVAWLRA 334
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTB_THET2 (Phytoene synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=crtB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.564e-21 Identity = 64/166 (38.55%), Postives = 92/166 (55.42%), Query Frame = -1 Query: 146 YCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNTWRNSMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPIAYAKSLLRP 643 YCY VAGTVG M P+ G +++A A+ LG A QLTNILRDVGED +R RVYLP D L G+ +D+ AG VT +R M + +AR + G+ L + R + + L YR ILD++ + Y+N +RA++ ++ LP A+ + P Sbjct: 126 YCYQVAGTVGRMMAPIAGGGKEAEAR-------AVKLGQAMQLTNILRDVGEDLERDRVYLPLDLLRAHGVEVEDLRAGRVTPGYRALMAHLEGKARALYREGLAGLGHL-KVGRAAIALAALQYRGILDKLRLSGYDNLGRRAHLKAWERALLLPKAFLAARFPP 283
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTM_STAHJ (Dehydrosqualene synthase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=crtM PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.986e-17 Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = -1 Query: 191 YCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLS-DDDIFAGEVTNTWRNSMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 643 YCY VAGTVG++ +P++ P +A Y LG A QLTNILRDVGED + GR+Y + L + +S D+I ++++ + + A +DM N + +E SR + + +YR IL E+ DY + RAYVSK KK Sbjct: 127 YCYGVAGTVGVLLIPILATPPSDEA-----YEYGKQLGEALQLTNILRDVGEDYRNGRIYFSKARLNEFNVSIADEIERDQLSDNYIKIWEFYATLADNNYDMVLNHLDVYNEESRMIIELAAQVYRGILTEVRKADY-SLKDRAYVSKWKK 272
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTB_ESCVU (Phytoene synthase OS=Escherichia vulneris GN=crtB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.798e-17 Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 170 YCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNTWRNSMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPIA 643 YCY+VAG VGLM VMG+ E V + A LG+A QLTNI RD+ +DA R YLP + L AGL+ ++ A E + I A ++ ++ G+ +L W + + +YR+I +++A + + +R + SK +KIA L A Sbjct: 134 YCYHVAGVVGLMMARVMGVRD------ERVLDRACDLGLAFQLTNIARDIIDDAAIDRCYLPAEWLQDAGLTPENYAARENRAALARVAERLIDAAEPYYISSQAGLHDLPPRCAWAIATARSVYREIGIKVKAAGGSAWDRRQHTSKGEKIAMLMAA 285
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTB_RHOS4 (Phytoene synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=crtB PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.978e-16 Identity = 58/168 (34.52%), Postives = 92/168 (54.76%), Query Frame = -1 Query: 146 YCYYVAGTVGLMSVPVMGIA-PDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNTWRNSMKNQIKRAR-MFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPIAYAKSLLRP 643 Y VA VG M +M + PD V A LG+A QLTNI RDVG DA+ GR+YLP+D + + GL ++ A V + ++ +++ RA + +E GV L A R ++A+ +Y I DEI N Y++ T+RA+ ++ +K+ L ++ ++ L P Sbjct: 133 YSARVAAAVGAMMCVLMRVRDPD-------VLARACDLGLAMQLTNIARDVGTDARSGRIYLPRDWMEEEGLPVEEFLARPVVDDRIRAVTHRLLRAADRLYLRSEAGVCGLPLACRPGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQKLVWLGLSATRAALSP 293
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTB_STRGR (Phytoene synthase OS=Streptomyces griseus GN=crtB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 185 YCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNTWRNSMKNQIKRA-----RMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIA 643 Y + A +GL +PV+G A E+ +AA ALG+A QLTN LRDVGED RGR+YLP + LA G +D D F + +S + RA R + A G+ L+ SR + + +LY ILD IEA+ Y +RA V + ++ A Sbjct: 142 YMHGSAAVIGLQMLPVLGTVV---AREEAAPHAA-ALGVAFQLTNFLRDVGEDLDRGRLYLPTELLAAHG-ADRDRFEWSRSTGMPDSRITDVLRAAAAHNRAVYRAALPGIAMLAPVSRPCIRTAFVLYSGILDAIEADGYAVLHRRAVVPRRRRAA 294
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTB_PANAN (Phytoene synthase OS=Pantoea ananas GN=crtB PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 51/170 (30.00%), Postives = 83/170 (48.82%), Query Frame = -1 Query: 134 YCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNTWRNSMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPIAYAKSLLRPSRIY 643 YCY+VAG VGLM +MG+ ++ + A LG+A QLTNI RD+ +DA GR YLP L GL+ ++ A E + ++ A ++ A G+ L S W + + +YR+I ++E + +R + +K+ L A ++L R + Sbjct: 134 YCYHVAGVVGLMMAQIMGVRDNA------TLDRACDLGLAFQLTNIARDIVDDAHAGRCYLPASWLEHEGLNKENYAAPENRQALSRIARRLVQEAEPYYLSATAGLAGLPLRSAWAIATAKQVYRKIGVKVEQAGQQAWDQRQSTTTPEKLTLLLAASGQALTSRMRAH 297
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTB_PARSN (Phytoene synthase OS=Paracoccus sp. (strain N81106 / MBIC 01143) GN=crtB PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 58/157 (36.94%), Postives = 77/157 (49.04%), Query Frame = -1 Query: 173 YCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNTWRNSMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPI 643 Y Y+VAG VG+M VMG+ D V + A LG+A QLTNI RDV +DA+ GR YLP D L QAG D T + + A +++ A G+ +L W + A+L +YR I I + +R SKA KI L I Sbjct: 130 YSYHVAGIVGVMMARVMGVRDDP------VLDRACDLGLAFQLTNIARDVIDDARIGRCYLPGDWLDQAGARVDGPVPSPELYT---VILRLLDAAELYYASARVGLADLPPRCAWSIAAALRIYRAIGLRIRKGGPEAYRQRISTSKAAKIGLLGI 277
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTB_RHOCA (Phytoene synthase OS=Rhodobacter capsulatus GN=crtB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.860e-12 Identity = 51/154 (33.12%), Postives = 77/154 (50.00%), Query Frame = -1 Query: 188 YCYYVAGTVGLMSVPVMGIA-PDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAG-EVTNTWRNSMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKI 643 Y VA VG M +M + PD+ A A LG+A Q++NI RDVGEDA+ GR++LP D + + G+ A + T R + + RA + A GV L R + A+ +Y I E+ Y+N T+RA+ +K +K+ Sbjct: 126 YSARVAAAVGAMMCVLMRVRNPDALAR-------ACDLGLAMQMSNIARDVGEDARAGRLFLPTDWMVEEGIDPQAFLADPQPTKGIRRVTERLLNRADRLYWRAATGVRLLPFDCRPGIMAAGKIYAAIGAEVAKAKYDNITRRAHTTKGRKL 272
BLAST of CB305043 vs. ExPASy Swiss-Prot
Match: CRTM_STAAN (Dehydrosqualene synthase OS=Staphylococcus aureus (strain N315) GN=crtM PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11 Identity = 48/151 (31.79%), Postives = 73/151 (48.34%), Query Frame = -1 Query: 191 YCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNTWRNSMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 643 YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED RVY + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 129 YCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERVYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273 The following BLAST results are available for this feature:
BLAST of CB305043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305043 ID=CB305043; Name=CB305043; organism=Citrus sinensis; type=EST; length=646bpback to top |