CB305046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_KLULA (40S ribosomal protein S1 OS=Kluyveromyces lactis GN=RPS1 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.575e-29 Identity = 68/126 (53.97%), Postives = 88/126 (69.84%), Query Frame = -1 Query: 272 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 646 V VKT+D+Y LR+F I FT++ NQVKRT YAQ+S IRQIR+ + EI+ + + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G K+ DE Sbjct: 125 VTVKTSDDYVLRIFAIAFTRKQANQVKRTSYAQSSHIRQIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLLSLHGEASAEEKGKKVAGFKDE 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_ANOGA (40S ribosomal protein S3a OS=Anopheles gambiae GN=RpS3A PE=2 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.687e-29 Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = -1 Query: 317 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 646 VDVKTTD + LR+FCIGFT + ++TCYAQ SQI+ IR KM I+ + S DLKG+VEK + + I ++IEKA +YPL +V+IRKVK+LK P+FDL LME+HGD Sbjct: 128 VDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 237
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_MONBE (40S ribosomal protein S3a OS=Monosiga brevicollis GN=34920 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.509e-29 Identity = 67/138 (48.55%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 245 YVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPADEPIPEAPTEV 649 +VDVKT D Y LR+F IGFTK+ N ++TCYAQ++Q R +R KM EIM + A+CDLK V K + IG+EI+K SI+PLQ+V+IRKVK+LK P+FD+ KL+E+HG+ + D G + + + P+ T V Sbjct: 123 FVDVKTNDGYVLRIFSIGFTKKQANSDRKTCYAQSAQKRALRAKMVEIM-QREATCDLKEFVSKLMPGTIGQEIQKKCQSIFPLQDVYIRKVKVLKKPRFDVSKLLELHGEAGGVTADKGKTVAKSGEFVEPKPQTSV 259
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_ANODA (40S ribosomal protein S3a OS=Anopheles darlingi PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.583e-29 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = -1 Query: 317 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 646 VDVKTTD Y LR+FCIGFT + ++TCYAQ SQI+ IR++M I+ + + DLKG+VEK + + I ++IEKA +YPL +VFIRKVK+LK P+FDL L+E+HGD Sbjct: 128 VDVKTTDGYLLRVFCIGFTIKDSVSQRKTCYAQHSQIKNIRQRMTTIIKREIINSDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVFIRKVKVLKKPRFDLSSLLELHGD 237
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29 Identity = 68/126 (53.97%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 272 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 646 V VKT+D+Y LR+F I FT++ NQVKRT YAQ+S IR IR+ + EI+ + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ DE Sbjct: 125 VTVKTSDDYVLRVFAIAFTRKQSNQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_AEDAE (40S ribosomal protein S3a OS=Aedes aegypti GN=AAEL005901 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29 Identity = 67/142 (47.18%), Postives = 93/142 (65.49%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----------YSEDVGVKMERPA--DEPIPEA 646 VDVKTTD Y LR+FCIGFT + ++TCYAQ SQI++IRRKM I+ S DLK +V K + + I ++IEK+ IYPL +V+IRKVK+LK P+FDL L+E+HGD + + GV ++RP + P+ E+ Sbjct: 128 VDVKTTDGYLLRVFCIGFTIKDSVSQRKTCYAQHSQIKEIRRKMTTIITRDVTSSDLKEVVNKLLPDSIAKDIEKSCQGIYPLHDVYIRKVKVLKKPRFDLANLLELHGDGGGKGAEVSTGAAEGGVTIDRPEGYEPPVQES 269
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_CAEBR (40S ribosomal protein S3a OS=Caenorhabditis briggsae GN=rps-1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.817e-29 Identity = 67/129 (51.94%), Postives = 88/129 (68.22%), Query Frame = -1 Query: 263 VKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KMERPADEPIP 640 VKTTD YTLR+F I FTK+ NQVK+T Y + S+IR+IR +M + + CDLK +V K I + IG++IEK +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG K++RP D P Sbjct: 125 VKTTDGYTLRVFVIAFTKKSANQVKKTSYTKTSKIRKIRSEMISCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKIDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_CULQU (40S ribosomal protein S3a OS=Culex quinquefasciatus GN=CPIJ008584 PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.021e-28 Identity = 60/110 (54.55%), Postives = 80/110 (72.73%), Query Frame = -1 Query: 317 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 646 VDVKTTDNY LR+FCIGFT + ++TCYAQ SQI+ IR+ M +I+ S DLK +V K + + I ++IEKA +YPL +V+IRKVK+LK P+FDL L+E+HGD Sbjct: 128 VDVKTTDNYLLRVFCIGFTIKDQVSQRKTCYAQHSQIKAIRKNMTQIITNNVTSSDLKEVVNKLLPDSIAKDIEKACQGVYPLHDVYIRKVKVLKKPRFDLANLLELHGD 237
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMA (40S ribosomal protein S3a OS=Bombyx mandarina PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.021e-28 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPA--DEPIPEA 646 +DVKTTD Y LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K ERP + P+ E+ Sbjct: 128 IDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKREAGDKSERPEGYEPPVQES 262
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_SPOFR (40S ribosomal protein S3a OS=Spodoptera frugiperda PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.742e-28 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----DVGVKMERPA--DEPIPEA 646 +DVKTTD Y LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K ERP + P+ E+ Sbjct: 128 IDVKTTDGYLLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEAGDKSERPEGYEPPVQES 263 The following BLAST results are available for this feature:
BLAST of CB305046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305046 ID=CB305046; Name=CB305046; organism=Citrus sinensis; type=EST; length=649bpback to top |