CB305052
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.759e-46 Identity = 86/122 (70.49%), Postives = 105/122 (86.07%), Query Frame = -1 Query: 184 SLGSVKGISKTFGLKCSPNFQASM--AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 543 S+GS K +S++FGLKCS N + AVYK+KL+GP G+E EFE Q+DQYILDAAEEAGVDLPYSCRAGACSTCAG++VSG+VDQSDGSFL+D+ +E GY+LTC++YP SDCVI +HKE EL Sbjct: 33 SVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.646e-44 Identity = 86/125 (68.80%), Postives = 100/125 (80.00%), Query Frame = -1 Query: 184 KSPTSLGSVKGISKTFGLKCSPNFQAS-MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 555 KSP+SL ++K LK S S MAVYK+KL+GP+GEEHEF+A +D YILDAAE AGV+LPYSCRAGACSTCAGK+ SGSVDQSDGSFLDD Q E GY+LTC+SYP SDCVI +HKE +L Sbjct: 27 KSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGDL 151
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.595e-39 Identity = 72/96 (75.00%), Postives = 87/96 (90.62%), Query Frame = -1 Query: 184 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 471 AVYK+KLIGP+GEE+EFE Q+DQ+ILDAAEEAGVDLPYSCRAGACSTCAG++V G VDQS+GSFL+D+ E G++LTC++YP SDCVI +HKE EL Sbjct: 2 AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.350e-38 Identity = 72/96 (75.00%), Postives = 84/96 (87.50%), Query Frame = -1 Query: 184 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 471 AVYK+KLIGP G+E+EF+ +DQYILDAAEEAGVDLPYSCRAGACSTCAGK+ G VDQSDGSFL+D+ E GY+LTC++YP SD VI +HKEEEL Sbjct: 2 AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEEL 97
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.007e-38 Identity = 74/120 (61.67%), Postives = 94/120 (78.33%), Query Frame = -1 Query: 184 GSVKGISKTFGLKCSPNFQASMA--VYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 537 G + ++ G + S F AS A ++K+KL+GP G EHEFEA +D YIL+AAE AGV+LP+SCRAG+CSTCAG++ +G VDQS+GSFLDD QM GYLLTCISYP +DCVI +HKEE+L Sbjct: 35 GHARQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_MASLA (Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 5.671e-37 Identity = 72/98 (73.47%), Postives = 85/98 (86.73%), Query Frame = -1 Query: 184 MAVYKIKLIGP-KGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 474 MA YK+ LI +G E +DQYILDAAEEAG+DLPYSCRAGACSTCAGKL+SG+VDQSD SFLDD+Q+EAGY+LTC++YPTSDCVI++HKEEEL Sbjct: 1 MATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.650e-36 Identity = 77/129 (59.69%), Postives = 97/129 (75.19%), Query Frame = -1 Query: 184 KSPTSLGSVK--GISKTFGLKCSP---NFQASMAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 555 ++P SL S+ FGLK S +MA YK+K I P+GE+ E E +ED Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGS+DQSD SFLDD QM GY+LTC++YPTSD VI++HKEE + Sbjct: 20 QTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGEQ-EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAI 147
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER1_PEA (Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.155e-36 Identity = 76/126 (60.32%), Postives = 95/126 (75.40%), Query Frame = -1 Query: 184 PTSLGSVKGISKTF-GLKCS---PNFQASMAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 549 P S+ + K S F GLK S + +MA YK+KL+ P G + EFE D YILD AEE G+DLPYSCRAG+CS+CAGK+V G VDQSDGSFLDD Q+EAG++LTC++YPTSD VI++HKEE+L Sbjct: 23 PMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLVTPDGTQ-EFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPTSDVVIETHKEEDL 147
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.815e-36 Identity = 70/97 (72.16%), Postives = 84/97 (86.60%), Query Frame = -1 Query: 184 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 474 MA Y +KLI P GE + E +D YILDAAEEAG+DLPYSCRAGACSTCAGK+ +GSVDQSD SFLDD+Q+EAGY+LTC++YPTSDC I++HKEE+L Sbjct: 1 MASYTVKLITPDGE-NSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 3.676e-36 Identity = 70/97 (72.16%), Postives = 83/97 (85.57%), Query Frame = -1 Query: 184 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 474 MA Y +KLI P GE E +D YILDAAEEAG+DLPYSCRAGACSTCAGK+ +GSVDQSD SFLDD+Q+EAGY+LTC++YPTSDC I++HKEE+L Sbjct: 1 MASYTVKLITPDGES-SIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96 The following BLAST results are available for this feature:
BLAST of CB305052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305052 ID=CB305052; Name=CB305052; organism=Citrus sinensis; type=EST; length=555bpback to top |