CB305052
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32 Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = -1 Query: 184 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 474 MA YK+ L+ P G E + ED+YILD AEE G+DLP+SCRAGACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC++YP SDC I +++EEEL Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32 Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = -1 Query: 184 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 474 MA YK+ L+ P G E + ED+YILD AEE G+DLP+SCRAGACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC++YP SDC I +++EEEL Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32 Identity = 63/96 (65.62%), Postives = 80/96 (83.33%), Query Frame = -1 Query: 184 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 471 A YK+ L P G++ E +D YILDAAEEAG+DLPYSCRAGACS+CAGK+ +G+VDQSD SFLDD+QM+ G++LTC++YPTSDC I +HKEE+L Sbjct: 1 ATYKVTLKTPSGDQ-TIECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDL 95
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_GUITH (Ferredoxin OS=Guillardia theta GN=petF PE=3 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 2.466e-32 Identity = 64/97 (65.98%), Postives = 80/97 (82.47%), Query Frame = -1 Query: 184 MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 474 MA YK+KL G +G + + +DQYILDAAEE G+DLPYSCRAGACSTCAGK+ +GSVDQSD SFLDD+Q+ G++LTC++YPTSDC I +H+EE L Sbjct: 1 MATYKVKLSG-EGVDKTIDCPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVAAGSVDQSDQSFLDDSQIGDGFVLTCVAYPTSDCTILTHQEEGL 96
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.466e-32 Identity = 66/96 (68.75%), Postives = 78/96 (81.25%), Query Frame = -1 Query: 184 VYKIKLIGPK-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 468 +YKI+L+ K G + DQYILDAAEE GVDLPYSCRAGACSTCAGKLV GSVDQSD SFLD+ Q+ G++LTC++YPTSDCVIQ+H+EE L Sbjct: 1 MYKIQLVNQKEGVDVTINCPGDQYILDAAEEQGVDLPYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSDCVIQTHQEEAL 96
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_SILPR (Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.220e-32 Identity = 67/123 (54.47%), Postives = 90/123 (73.17%), Query Frame = -1 Query: 184 PTSLGSVKGISKTFGLKCSPNFQAS-MAVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 549 PT++G FGLK + + MA YK+ LI + F+ +D Y+LD AEE G+DLPYSCRAG+CS+CAGK+V+GSVDQSD SFLDD+Q+EAG++LTC +YP++D I++HKEEEL Sbjct: 27 PTNMGQA-----LFGLKAGSRGRVTAMATYKVTLITKESGTVTFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPSADVTIETHKEEEL 144
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_SAMNI (Ferredoxin OS=Sambucus nigra PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.220e-32 Identity = 64/96 (66.67%), Postives = 80/96 (83.33%), Query Frame = -1 Query: 184 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 471 A YK+KLI P G + EFE +D YIL+ AEE G+D+PYSCRAG+CS+CAGKLV+GSVDQSD SFLDD Q+E G++LTC++YP SD I++HKEEEL Sbjct: 1 ASYKVKLITPDGPQ-EFECPDDVYILEHAEELGIDIPYSCRAGSCSSCAGKLVAGSVDQSDQSFLDDEQIEEGWVLTCVAYPKSDVTIETHKEEEL 95
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER_ARCLA (Ferredoxin OS=Arctium lappa PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.220e-32 Identity = 67/97 (69.07%), Postives = 84/97 (86.60%), Query Frame = -1 Query: 184 AVYKIKLIGPKGEEHEFEAQEDQYILD-AAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 471 A YK+ LI P+G++ EFE +D YILD AAEE G DLPYSCRAG+CS+CAGK+ +GSVDQSDGS+LDD+QMEAG++LTC++YPTSD I++HKEEEL Sbjct: 1 ATYKVTLITPEGKQ-EFEVPDDVYILDHAAEEVG-DLPYSCRAGSCSSCAGKVTAGSVDQSDGSYLDDDQMEAGWVLTCVAYPTSDVTIETHKEEEL 95
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER5_MAIZE (Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.206e-32 Identity = 69/132 (52.27%), Postives = 94/132 (71.21%), Query Frame = -1 Query: 184 TSLGSVKGISKTFGLKCSPNFQASM-----------AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 546 T L S + + +F L+ +P +M A Y +KLI P+GE E + +D YILD AEE G+DLPYSCRAG+CS+CAGK+VSGS+DQSD SFLDD+Q+ G++LTC++YPTSD VI++HKE++L Sbjct: 3 TVLSSPRAPAFSFSLRAAPATTVAMTRGASSRLRAQATYNVKLITPEGEV-ELQVPDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGSLDQSDQSFLDDSQVADGWVLTCVAYPTSDVVIETHKEDDL 133
BLAST of CB305052 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.206e-32 Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = -1 Query: 184 AVYKIKLIGPKGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 471 A YK+ L+ P G + E +D+YILDAAEE G+DLPYSCRAGACS+CAGK+ SGSVDQSD SFL+D QME G++LTCI+YPT D I++HKEEEL Sbjct: 1 ATYKVTLVTPSGSQ-VIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 95 The following BLAST results are available for this feature:
BLAST of CB305052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305052 ID=CB305052; Name=CB305052; organism=Citrus sinensis; type=EST; length=555bpback to top |