CB305055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.748e-22 Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 +NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG Sbjct: 24 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.748e-22 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 DNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 24 DNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.748e-22 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 DNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 24 DNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.282e-22 Identity = 50/53 (94.34%), Postives = 53/53 (100.00%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG Sbjct: 24 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.282e-22 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 +NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 24 ENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.893e-22 Identity = 50/53 (94.34%), Postives = 53/53 (100.00%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 +NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 24 ENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.893e-22 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 +NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 24 ENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_HORVU (40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.893e-22 Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = -3 Query: 164 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVY-QKA 325 LAVLQFYKVDD+ GKV RLRKECPNA+CGAG FMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_MAIZE (40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.641e-22 Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = -3 Query: 164 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVY-QKA 325 LAVLQFYKVDD+ GKV RLRKECPN ECGAG FMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_ORYSJ (40S ribosomal protein S27a OS=Oryza sativa subsp. japonica GN=UBQ6 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 1.932e-21 Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = -3 Query: 164 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVY-QKA 325 LAVLQFYKVDD+ GKV RLRKECPN +CGAG FMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79 The following BLAST results are available for this feature:
BLAST of CB305055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305055 ID=CB305055; Name=CB305055; organism=Citrus sinensis; type=EST; length=555bpback to top |