CB305055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.523e-21 Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 +NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 24 ENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 3.296e-21 Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 401 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 553 +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 13 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: R27AA_ARATH (40S ribosomal protein S27a-1 OS=Arabidopsis thaliana GN=UBQ15 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.342e-21 Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = -3 Query: 164 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQKA 325 LAVLQFYKVD SGKVQRL+KECP+ CG G FMA+HFDRHYCGKCG TYV++KA Sbjct: 24 LAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKA 77
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_DAUCA (40S ribosomal protein S27a (Fragment) OS=Daucus carota PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.872e-19 Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = -3 Query: 194 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGK 325 LAVLQFYKVD+SGKVQRLRKECPN ECGAG FMANHFDRHYCGK Sbjct: 24 LAVLQFYKVDESGKVQRLRKECPNGECGAGTFMANHFDRHYCGK 67
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_CHICK (40S ribosomal protein S27a OS=Gallus gallus GN=RPS27A PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.172e-18 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSEECGAGVFMASHFDRHYCGKCCLTYCFNK 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_HUMAN (40S ribosomal protein S27a OS=Homo sapiens GN=RPS27A PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.531e-18 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNK 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_CAVPO (40S ribosomal protein S27a OS=Cavia porcellus GN=RPS27A PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.531e-18 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNK 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_BOVIN (40S ribosomal protein S27a OS=Bos taurus GN=RPS27A PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.531e-18 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNK 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_ICTPU (40S ribosomal protein S27a OS=Ictalurus punctatus GN=rps27a PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.411e-18 Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL++YKVD++GK+ RLR+ECP ECGAG FMA+HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLTYCFNK 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_RAT (40S ribosomal protein S27a OS=Rattus norvegicus GN=Rps27a PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.454e-18 Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FM +HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNK 76 The following BLAST results are available for this feature:
BLAST of CB305055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305055 ID=CB305055; Name=CB305055; organism=Citrus sinensis; type=EST; length=555bpback to top |