CB305063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18 Identity = 61/182 (33.52%), Postives = 77/182 (42.31%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHC---TSPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT-------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFFA + ET+ +C + E N +C T YPC YYGRGP+QL N NY E G +G + L+ PE VA D V+SF+ ALWFWM H V+ GF I EC + + +R+ Y YC VDPG L C Sbjct: 119 AAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVAD--YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYC 298
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.700e-17 Identity = 58/176 (32.95%), Postives = 78/176 (44.32%), Query Frame = -3 Query: 160 AAFFAHVTHETTD---------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGF--DGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFF +HET +C++++ ++D YYGRGPIQLT NY AG+ IG + +N+P+ VA D +ISFKTA+WFWMT H+V+ G+ ING ECG R+ Y YC V G L+C Sbjct: 83 AAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDR--------------YYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDC 244
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 7.444e-17 Identity = 48/106 (45.28%), Postives = 61/106 (57.55%), Query Frame = -3 Query: 325 AAFFAHVTHETTDFCYIEEKNKADPH-----------------CTSPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT 591 AAF AH++ T+ E + +PH CTS +PCA GK Y RGPIQLT N NY AG+AIG D + +P+ V +D +ISFKTALWFWM+ Sbjct: 184 AAFLAHISQATSG----ERSDVENPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMS 285
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.722e-17 Identity = 58/176 (32.95%), Postives = 78/176 (44.32%), Query Frame = -3 Query: 160 AAFFAHVTHETTD---------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGF--DGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFF +HET +C++ + +++D YYGRGPIQLT NY AG+ IG D +N+P+ VA D +ISF+TA+WFWMT H+V+ G+ ING EC V R+ Y YC V G L+C Sbjct: 83 AAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDR--------------YYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDC 244
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.231e-16 Identity = 53/150 (35.33%), Postives = 66/150 (44.00%), Query Frame = -3 Query: 205 AAFFAHVTHETTDFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTD 591 AAF A +HETT P Y + Y+GRGPIQ++ N NY AG+AIG D L +P+ V D + FKTALWFWMT H V+ G+ I+G ECG V DR+ Y D Sbjct: 49 AAFLAQTSHETTG---------GWPTAPDGPYELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKD 189 The following BLAST results are available for this feature:
BLAST of CB305063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305063 ID=CB305063; Name=CB305063; organism=Citrus sinensis; type=EST; length=593bpback to top |