CB305071

Overview
NameCB305071
Unique NameCB305071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: S15A2_RABIT (Solute carrier family 15 member 2 OS=Oryctolagus cuniculus GN=SLC15A2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14
Identity = 52/183 (28.42%), Postives = 86/183 (46.99%), Query Frame = -3
Query:   61 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS------WAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEE 591
            G++KT+ + S+ + LG ++ SL+A       P  G +                  GL L+ +G GGI+PC  AFG DQF    E   +  T +F+ +Y       +IS  +   ++ DV       +A   G+P  +M ++  +F +GS++Y K  PEG+ +A  V+    AI  R     E+
Sbjct:  109 GKFKTIIYLSLVNVLGHVIKSLSAF------PILGGKVV---------HTVLSLVGLCLIALGTGGIKPCVAAFGGDQFE---EKHAEERTRYFSGFYLAINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKMYKKPPPEGNIVAQVVKCIWFAISNRFKNRSED 273          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: S15A1_HUMAN (Solute carrier family 15 member 1 OS=Homo sapiens GN=SLC15A1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14
Identity = 50/178 (28.09%), Postives = 83/178 (46.63%), Query Frame = -3
Query:   82 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMIS--LTVIVYVQ------SDVSWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKR 591
            G++KT+   S+   +G  V S+++        D  + +    P   P  +     GL L+ +G GGI+PC  AFG DQF    E  +     FF+ +Y       ++S  +T ++ VQ          +    G+PA +M ++  +F LGS +Y K KP+G+ +    +    AIK R
Sbjct:   79 GKFKTIVSLSIVYTIGQAVTSVSSI------NDLTDHNHDGTPDSLPVHVVLSLIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQR---NRFFSIFYLAINAGSLLSTIITPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCIGFAIKNR 247          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: PEPT1_DROME (Peptide transporter family 1 OS=Drosophila melanogaster GN=yin PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 7.704e-14
Identity = 58/190 (30.53%), Postives = 85/190 (44.74%), Query Frame = -3
Query:   52 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-------SWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIK---KRHLKLPEEPWL 591
            G+YKT+ + S+   LG +V+S                  GA P       A    GL L+ IG GGI+PC  AFG DQF+   +S +  +  FF+ +YF      +IS T    +++DV        ++   G+PA +M  S  +F  G RLY    P G+ +    +    A K   KR    P E +L
Sbjct:   99 GKYKTILYLSLVYSLGAMVVSF-----------------GAVPLSGMPTKAVTVVGLLLIAIGTGGIKPCVSAFGGDQFSLPAQSFQ--LAKFFSLFYFAINAGSLISTTFTPILRADVHCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLYRCQPPAGNMIFGVSRCIADAFKGWQKRRHSEPMESFL 269          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: S15A2_MOUSE (Solute carrier family 15 member 2 OS=Mus musculus GN=Slc15a2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 54/185 (29.19%), Postives = 83/185 (44.86%), Query Frame = -3
Query:   61 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACP--GPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS------WAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEE 591
            G++KT+ + S+   LG +  SL                 GA P  G           GL L+ +G GGI+PC  AFG DQF    E   +  T +F+ +Y +     +IS  +   ++ DV       +A   GIP  +M L+  +F +GS++Y K  PEG+ +A   +    AI  R     E+
Sbjct:  109 GKFKTIIYLSLVYVLGHVFKSL-----------------GAIPILGGKMLHTILSLVGLSLIALGTGGIKPCVAAFGGDQFE---EEHAEARTRYFSVFYLSINAGSLISTFITPMLRGDVKCFGEDCYALAFGIPGLLMVLALVVFAMGSKMYRKPPPEGNIVAQVTKCIWFAICNRFRNRSED 273          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: S15A1_CANFA (Solute carrier family 15 member 1 OS=Canis familiaris GN=SLC15A1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13
Identity = 51/179 (28.49%), Postives = 83/179 (46.37%), Query Frame = -3
Query:   82 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVI---------VYVQSDVSWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKR 591
            G++KT+   S+   +G  V     A+S ++  D  + +    P      +A    GL L+ +G GGI+PC  AFG DQF    E  +     FF+ +Y       +IS  V          +Y Q    +    G+PA +M +S  +F +GS +Y K +P+G+ +   V+    A+K R
Sbjct:   79 GKFKTIVSLSIVYTIGQAV----TAVSSIN--DLTDYNKDGTPDNLSVHVALSMIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQR---NRFFSIFYLAINAGSLISTIVTPMLRVHECGIYSQK-ACYPLAFGVPAALMAVSLIVFVIGSGMYKKFQPQGNVMGKVVKCIGFALKNR 247          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: S15A2_RAT (Solute carrier family 15 member 2 OS=Rattus norvegicus GN=Slc15a2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 51/178 (28.65%), Postives = 81/178 (45.51%), Query Frame = -3
Query:   82 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACP--GPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS------WAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKR 591
            G++KT+ + S+   LG +  SL                 GA P  G           GL L+ +G GGI+PC  AFG DQF    E   +  T +F+ +Y       +IS  +   ++ DV       +A   G+P  +M L+  +F +GS++Y K  PEG+ +A  ++    A+  R
Sbjct:  109 GKFKTIIYLSLVYVLGHVFKSL-----------------GAIPILGGKMLHTILSLVGLSLIALGTGGIKPCVAAFGGDQFE---EEHAEARTRYFSVFYLAINAGSLISTFITPMLRGDVKCFGQDCYALAFGVPGLLMVLALVVFAMGSKMYRKPPPEGNIVAQVIKCIWFALCNR 266          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: S15A2_HUMAN (Solute carrier family 15 member 2 OS=Homo sapiens GN=SLC15A2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = -3
Query:   82 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS------WAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKR 591
            G++KT+ + S+   LG ++ SL A       P  G Q                  GL L+ +G GGI+PC  AFG DQF    E   +  T +F+ +Y +     +IS  +   ++ DV       +A   G+P  +M ++  +F +GS++Y K  PEG+ +A   +    AI  R
Sbjct:  109 GKFKTIIYLSLVYVLGHVIKSLGAL------PILGGQVV---------HTVLSLIGLSLIALGTGGIKPCVAAFGGDQFE---EKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNR 266          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: S15A4_BOVIN (Solute carrier family 15 member 4 OS=Bos taurus GN=SLC15A4 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 46/172 (26.74%), Postives = 77/172 (44.77%), Query Frame = -3
Query:  100 GRYKTLGFASVASFLGMLVLSLTAAISKLH-------PPDCGNQDSGACPG-PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFV 591
            GR + +  +     LGML   L AA +          P +  N  +  C   PT +    + + L L+ +G G ++     FGADQ     + G +    FFNW+Y++     ++SL  I Y+Q +VS+  G  IPA  + ++  +F  G   +    P+GS      ++ V
Sbjct:   90 GRARAILLSLALYLLGMLAFPLLAAPATRSALCGAPGPTNVRNCSAPPCTDTPTRYCAPAVLSALALVGLGVGAVKANITPFGADQVK---DRGPEATRRFFNWFYWSINLGAIVSLGGIAYIQQNVSFVTGYAIPAVCIGVAFVVFLCGQTFFITKPPDGSAFTDMFRILV 258          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: PEPT2_CAEEL (Peptide transporter family 2 OS=Caenorhabditis elegans GN=pept-2 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 9.417e-12
Identity = 52/176 (29.55%), Postives = 83/176 (47.16%), Query Frame = -3
Query:   82 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS------DVSWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKR 591
            G++ T+ F S+    G ++L    A S + P       SG+   P    L  L  GLG      GGI+PC  AFG DQF  +     + I+ FF+ +YF+     +IS+ +  Y +S      D  +    GIPA +M ++  +F  GS  Y KV P+ + +   +     A++K+
Sbjct:   97 GKFWTIFFISIFYACGQILL----AFSSIAP-------SGSSHHPLLDLLGLLIVGLG-----TGGIKPCVSAFGGDQFPAHY---TRMISLFFSMFYFSINAGSLISMWLTPYFRSMSCFGHDSCYPLAFGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTITTALRKK 253          
BLAST of CB305071 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11
Identity = 47/167 (28.14%), Postives = 74/167 (44.31%), Query Frame = -3
Query:  106 GRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA-----FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQV 591
            GR + +  +     LGML   L AA +      CG+     C  P P   A       F GL L+ +G   ++     FGADQ     + G +    FFNW+Y++     ++SL  I Y+Q +VS+  G  IP   + L+  +F  G  ++    P+GS      ++
Sbjct:  101 GRARAILLSLALYLLGMLAFPLLAAPAT-RAALCGSARLLNCTAPGPDAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVK---DRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKI 263          
The following BLAST results are available for this feature:
BLAST of CB305071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
S15A2_RABIT3.458e-1428.42Solute carrier family 15 member 2 OS=Oryctolagus c... [more]
S15A1_HUMAN3.458e-1428.09Solute carrier family 15 member 1 OS=Homo sapiens ... [more]
PEPT1_DROME7.704e-1430.53Peptide transporter family 1 OS=Drosophila melanog... [more]
S15A2_MOUSE1.006e-1329.19Solute carrier family 15 member 2 OS=Mus musculus ... [more]
S15A1_CANFA1.314e-1328.49Solute carrier family 15 member 1 OS=Canis familia... [more]
S15A2_RAT1.716e-1328.65Solute carrier family 15 member 2 OS=Rattus norveg... [more]
S15A2_HUMAN1.716e-1328.98Solute carrier family 15 member 2 OS=Homo sapiens ... [more]
S15A4_BOVIN4.227e-1226.74Solute carrier family 15 member 4 OS=Bos taurus GN... [more]
PEPT2_CAEEL9.417e-1229.55Peptide transporter family 2 OS=Caenorhabditis ele... [more]
S15A4_HUMAN1.230e-1128.14Solute carrier family 15 member 4 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_F09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_F09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305071 ID=CB305071; Name=CB305071; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGGAATATGGTTATGAAGGG
TGAGCCACGGTTCCTCTGGTAACTTCAAGTGCCTCTTCTTGATTGCGGCC
ACAAAGACCTGCACCGTACTAGCCAATGGACTGCCCTCTGGTTTTACTTT
CGCATAAAGTCTAGATCCCAGGAAGAACATTGCACAGGATAAGAACATCA
TAAATGCAGGGATTCCCAATCCCCAGGCCCAGCTCACATCCGATTGCACG
TAAACAATGACTGTCAAAGATATCATCATCGCGAAGGTGAAGGTGAAGTA
GTACCAATTGAAGAAGCTGGTGATTCCCTGCTTCCCAGATTCAGTATTGG
GATTAAATTGGTCAGCACCAAAGGCCAAGTTACATGGCCTAATGCCGCCA
GCTCCAATTACCATCAGTCCTAGCCCAGTGAACAGAAAAGCCAGTTGCCA
TGGTGTTGGCCCAGGGCACGCTCCAGAATCTTGATTTCCACAATCAGGTG
GGTGCAGTTTTGAGATTGCTGCTGTCAAAGAAAGTACAAGCATCCCCAGA
AAAGAGGCAACAGAAGCGAATCCCAGAGTCTTGTACCGGCCAA
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