CB305090

Overview
NameCB305090
Unique NameCB305090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2673 contig Csv1_Contig2673:872..1385. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CALM_ASPOR (Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.053e-23
Identity = 49/64 (76.56%), Postives = 60/64 (93.75%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            ++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:   86 IREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CALM_AJECG (Calmodulin OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=CAM1 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.053e-23
Identity = 49/64 (76.56%), Postives = 60/64 (93.75%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            ++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:   86 IREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML5_ORYSJ (Calmodulin-like protein 5 OS=Oryza sativa subsp. japonica GN=CML5 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.126e-22
Identity = 48/62 (77.42%), Postives = 60/62 (96.77%), Query Frame = -2
Query:  328 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 513
            L+EAF+VFDKDQ+G ISAAELRHVM +LGEKLTDEEV++MIREAD+DGDGQ+N++EFV++MM
Sbjct:  101 LREAFKVFDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIREADLDGDGQVNFDEFVRMMM 162          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML4_ORYSJ (Calmodulin-like protein 4 OS=Oryza sativa subsp. japonica GN=CML4 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.123e-21
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = -2
Query:  331 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 513
            LKEAF V DKDQNGFIS  ELR VMTNLGEK+TDEEV++MIREAD DGDGQ+NY+EFV +M
Sbjct:   85 LKEAFEVLDKDQNGFISPTELRTVMTNLGEKMTDEEVEQMIREADTDGDGQVNYDEFVIMM 145          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML2_ORYSJ (Putative calmodulin-like protein 2 OS=Oryza sativa subsp. japonica GN=CML2 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.730e-21
Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            ++EAFRVFDKDQNGFI+  ELRHVM NLG+ L+D+E+ +M+ EAD DGDGQINY EF+KVMMAK
Sbjct:   85 IREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEADSDGDGQINYNEFLKVMMAK 148          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML3_ORYSJ (Calmodulin-like protein 3 OS=Oryza sativa subsp. japonica GN=CML3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.229e-20
Identity = 44/64 (68.75%), Postives = 55/64 (85.94%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            +++AFRVFDKDQNGFI+  ELRHVM NL + L+D+E+ +M+ EAD DGDGQINY EF+KVMMAK
Sbjct:   85 IRDAFRVFDKDQNGFITPDELRHVMANLSDPLSDDELADMLHEADSDGDGQINYNEFLKVMMAK 148          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CALL_DROME (Calmodulin-related protein 97A OS=Drosophila melanogaster GN=And PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 5.229e-20
Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            ++EAF++FD+D +GFIS AELR VM NLGEK+TDEE+DEMIREAD DGDG INYEEFV ++  K
Sbjct:   85 MREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQK 148          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CABO_LOLPE (Squidulin OS=Loligo pealeii PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.595e-19
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            ++EAFRVFDKD NG I+AAELR VM N   EKLT EE+ EMIREAD+DGDG +NYEEFVK+M  K
Sbjct:   85 MREAFRVFDKDGNGLITAAELRQVMANFSDEKLTSEEISEMIREADIDGDGMVNYEEFVKMMTPK 149          

HSP 2 Score: 68.1662 bits (165), Expect = 2.601e-11
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = -2
Query:  304 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK**PQPP 513
            +K+AF +FD D +G I++ ELR VM +LG   +D E++EMIRE D DG+G I Y EFV++M  +  P  P
Sbjct:   12 IKDAFDMFDIDGDGQITSKELRSVMKSLGRTPSDAELEEMIREVDTDGNGTIEYAEFVEMMAKQMGPTDP 81          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML10_ARATH (Calmodulin-like protein 10 OS=Arabidopsis thaliana GN=CML10 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.869e-18
Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            LK+ FR+FD D+NGFISAAE+R+V T L  K TDEE+DE+I+ ADVDGDGQINY EF ++MMAK
Sbjct:   83 LKKDFRLFDIDKNGFISAAEMRYVRTILRWKQTDEEIDEIIKAADVDGDGQINYREFARLMMAK 146          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CALM_SCHPO (Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.392e-18
Identity = 41/64 (64.06%), Postives = 54/64 (84.38%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            ++EAF+VFDKD NG+I+  EL HV+T+LGE+L+ EEV +MIREAD DGDG INYEEF +V+ +K
Sbjct:   87 VREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISSK 150          
The following BLAST results are available for this feature:
BLAST of CB305090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
CALM_ASPOR5.053e-2376.56Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2[more]
CALM_AJECG5.053e-2376.56Calmodulin OS=Ajellomyces capsulata (strain ATCC 2... [more]
CML5_ORYSJ1.126e-2277.42Calmodulin-like protein 5 OS=Oryza sativa subsp. j... [more]
CML4_ORYSJ2.123e-2178.69Calmodulin-like protein 4 OS=Oryza sativa subsp. j... [more]
CML2_ORYSJ4.730e-2171.88Putative calmodulin-like protein 2 OS=Oryza sativa... [more]
CML3_ORYSJ5.229e-2068.75Calmodulin-like protein 3 OS=Oryza sativa subsp. j... [more]
CALL_DROME5.229e-2070.31Calmodulin-related protein 97A OS=Drosophila melan... [more]
CABO_LOLPE2.595e-1970.77Squidulin OS=Loligo pealeii PE=1 SV=1[more]
CML10_ARATH2.869e-1868.75Calmodulin-like protein 10 OS=Arabidopsis thaliana... [more]
CALM_SCHPO6.392e-1864.06Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_H10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_H10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305090 ID=CB305090; Name=CB305090; organism=Citrus sinensis; type=EST; length=514bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACATCGCAAGGGTAGAAA
TTAATGAAACACATTAAACAGACAACAACATTCATAGAACAGCAGAACAA
CTAAAATAATAAAAACCGAAAAGTTTTGCGAGTCACAAGACATATTGACG
AGGGAGACAACATTCTTCCTACACCATCAGGCCCATCACCATTAAAAGAC
CATTGCTTCCTTTAGCCTGACCCTCATGACTATCAAATTAAAAATTGTAA
AAGAGAAAACTAGGAATCCCTTTATAATTTAGTCAACCCATTTTATAAGT
ATTGGGGGGTTGGGGTCATTACTTGGCCATCATAACCTTGACAAATTCCT
CATAATTTATCTGGCCATCACCATCAACATCAGCTTCCCTTATCATCTCA
TCAACTTCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATCACATGGCG
CAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCGGA
AGGCCTCTTTCAGC
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