CB305108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305108 vs. ExPASy Swiss-Prot
Match: R27A1_ENTHI (60S ribosomal protein L27a-1 OS=Entamoeba histolytica GN=rpl27a-1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.281e-25 Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = -3 Query: 179 FDKYHPGFFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASK----DNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 484 F +HP +FGK GMR FH NK++CP +N+D LWS+V +D++A+ + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S+ A++KIK GGA LTA Sbjct: 45 FTTFHPDYFGKHGMRVFHLKANKYYCPSINVDSLWSLVGKDIQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFSEKAQQKIKAVGGACELTA 149
BLAST of CB305108 vs. ExPASy Swiss-Prot
Match: RL27A_DROME (60S ribosomal protein L27a OS=Drosophila melanogaster GN=RpL27A PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 8.203e-25 Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = -3 Query: 179 ILFDKYHPGFFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKD---NVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 490 I FDKYHPG+FGKVGMR FH R P +N+DKLWS+V + A+ K+ P+ID+ +FGY+K+LG+G LP +PV+VKAK SK AE KIK+AGG +L+A Sbjct: 44 INFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPA-RPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
BLAST of CB305108 vs. ExPASy Swiss-Prot
Match: R27A3_ENTHI (60S ribosomal protein L27a-3 OS=Entamoeba histolytica GN=rpl27a-3 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.399e-24 Identity = 55/106 (51.89%), Postives = 74/106 (69.81%), Query Frame = -3 Query: 179 FDKYHPGFFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDV----KAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 484 F +HP +FGK GMR FH NK++CP +N+D LWS+V +DV K + + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S+ A++KIK GGA LTA Sbjct: 45 FTTFHPDYFGKHGMRVFHLKANKYYCPSINVDSLWSLVGKDVQEQYKNAKTGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFSEKAQQKIKAVGGACELTA 149
BLAST of CB305108 vs. ExPASy Swiss-Prot
Match: R27A1_ARATH (Putative 60S ribosomal protein L27a-1 OS=Arabidopsis thaliana GN=RPL27AA PE=5 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.891e-21 Identity = 59/98 (60.20%), Postives = 62/98 (63.27%), Query Frame = -3 Query: 182 PGFFGK--VGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLT 469 PG G VGMRYFHKLRNKF+C IVN+DKLWSMV LGKG LPEN+PVVVKAKLVS T EKKIKEAG AVVLT Sbjct: 29 PGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV--------------------------LGKGFLPENKPVVVKAKLVSNTDEKKIKEAGSAVVLT 100
BLAST of CB305108 vs. ExPASy Swiss-Prot
Match: RL27A_TRYBB (60S ribosomal protein L27a OS=Trypanosoma brucei brucei GN=RPL27A PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.226e-20 Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = -3 Query: 179 ILFDKYHPGFFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV-PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 490 I F KYHPG+FGK GM ++HK +N P +N+D L ++ +D KA K V P+ID+ GY K+LG G L P +VKA+ VSK A+KKI++AGGAVVL A Sbjct: 43 INFRKYHPGYFGKCGMNHYHKKKNTTWKPTINLDNLTKLMAKDEAMKAKKGEVLPVIDLLANGYSKLLGNGHL--QAPCIVKARWVSKLADKKIRKAGGAVVLQA 145
BLAST of CB305108 vs. ExPASy Swiss-Prot
Match: RL27A_TENMO (60S ribosomal protein L27a OS=Tenebrio molitor GN=RpL27A PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = -3 Query: 179 ILFDKYHPGFFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKAS---KDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 490 I FDKYHPG+FGK+GMR +H RN P +N+DKLW++V + ++K + P+ID+ + GY+K+LGKG N ++K E KIK GGA VL+A Sbjct: 43 INFDKYHPGYFGKLGMRNYHLRRNSKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLGKGACLTNLS-LLKPSFSLNRLEDKIKAVGGACVLSA 148
BLAST of CB305108 vs. ExPASy Swiss-Prot
Match: RL27A_ENCCU (60S ribosomal protein L27a OS=Encephalitozoon cuniculi GN=RPL27A PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.895e-13 Identity = 36/103 (34.95%), Postives = 65/103 (63.11%), Query Frame = -3 Query: 182 FDKYHPGFFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAK--ASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLT 484 F ++HP + GK GMR +H+ N + ++ +LW M+P++ + + + VP+IDV +FGY V+G G L +P+VVKA+ + +A+++I + GG ++T Sbjct: 45 FTRFHPDYHGKRGMRVYHRKENSDYARPISSARLWGMIPKEQRYDFLDNPEKVPVIDVREFGYHVVVG-GKLSLERPIVVKARYFTPSAKEEITKVGGKWIIT 146 The following BLAST results are available for this feature:
BLAST of CB305108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305108 ID=CB305108; Name=CB305108; organism=Citrus sinensis; type=EST; length=492bpback to top |