CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433T_HUMAN (14-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTSD   E  + ++G E
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433T_CHICK (14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTSD   E  + ++G E
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433T_BOVIN (14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTSD   E  + ++G E
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.100e-29
Identity = 61/78 (78.21%), Postives = 71/78 (91.03%), Query Frame = -3
Query:  313 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEE 546
            ++LPPTHPIRLGLALNFSVFYYEILN  ++AC +AKQAF+EAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++
Sbjct:  166 ADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQ 243          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 143G2_ONCMY (14-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.436e-29
Identity = 63/83 (75.90%), Postives = 74/83 (89.16%), Query Frame = -3
Query:  295 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGEQSK 540
            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+L+E+SY+ STLIMQLLRDNL LWTSD   +EGGE +K
Sbjct:  165 MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYQDSTLIMQLLRDNLTLWTSDQQDDEGGEGNK 247          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.436e-29
Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = -3
Query:  304 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDL-PEEGGE 540
            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD   +EGGE
Sbjct:  165 MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQZDDEGGE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 143G1_DANRE (14-3-3 protein gamma-1 OS=Danio rerio GN=ywhag1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.436e-29
Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = -3
Query:  304 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGE 540
            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD   +EGGE
Sbjct:  165 MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDEGGE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 143B2_DANRE (14-3-3 protein beta/alpha-2 OS=Danio rerio GN=ywhab2 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.436e-29
Identity = 65/81 (80.25%), Postives = 71/81 (87.65%), Query Frame = -3
Query:  304 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGE 543
            ++ PTHPIRLGLALNFSVFYYEILNSPE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTS+   EE GE
Sbjct:  159 DMQPTHPIRLGLALNFSVFYYEILNSPENACQLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGEEAGE 239          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.436e-29
Identity = 61/78 (78.21%), Postives = 71/78 (91.03%), Query Frame = -3
Query:  313 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEE 546
            ++LPPTHPIRLGLALNFSVFY+EILNS ++AC +AKQAF+EAIAELD+L EESYK STLIMQLLRDNL LWTSD  ++
Sbjct:  171 TDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQ 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 143GB_XENLA (14-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-B PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.199e-29
Identity = 60/78 (76.92%), Postives = 70/78 (89.74%), Query Frame = -3
Query:  307 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGG 540
            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD  ++ G
Sbjct:  165 MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 242          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433T_HUMAN8.419e-3075.5814-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1... [more]
1433T_CHICK8.419e-3075.5814-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=... [more]
1433T_BOVIN8.419e-3075.5814-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 S... [more]
1433B_SOYBN1.100e-2978.2114-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
143G2_ONCMY1.436e-2975.9014-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2... [more]
143G1_ONCMY1.436e-2978.7514-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2... [more]
143G1_DANRE1.436e-2978.7514-3-3 protein gamma-1 OS=Danio rerio GN=ywhag1 PE... [more]
143B2_DANRE1.436e-2980.2514-3-3 protein beta/alpha-2 OS=Danio rerio GN=ywha... [more]
14310_SOLLC1.436e-2978.2114-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
143GB_XENLA3.199e-2976.9214-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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