CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433F_MOUSE (14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 5.457e-29
Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = -3
Query:  304 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGE 540
            + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD   EE GE
Sbjct:  165 MQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 5.457e-29
Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = -3
Query:  304 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGE 540
            + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD   EE GE
Sbjct:  165 MQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_CAEEL (14-3-3-like protein 2 OS=Caenorhabditis elegans GN=ftt-2 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.308e-29
Identity = 59/73 (80.82%), Postives = 69/73 (94.52%), Query Frame = -3
Query:  325 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD 543
            ++ PTHPIRLGLALNFSVF+YEILN+P++AC LAKQAFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD
Sbjct:  161 KMQPTHPIRLGLALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 233          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 143B2_ONCMY (14-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.708e-28
Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = -3
Query:  289 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 543
            E+ PTHPIRLGLALNFSVF+YEILN+PE+AC LAK AFDEAIAELD+L+E+SYK STLIMQLL+ +L LWTS+   + GE  +G+
Sbjct:  159 EMQPTHPIRLGLALNFSVFFYEILNNPEKACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLKGHLTLWTSENQGDEGETGEGE 243          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_NEOCA (14-3-3 protein homolog OS=Neospora caninum PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.344e-27
Identity = 57/84 (67.86%), Postives = 71/84 (84.52%), Query Frame = -3
Query:  286 PPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 537
            P THPIRLGLALN+SVF+YEILN P++AC +AK+AFD+AI E D++SE+SYK STLIMQLLRDNL LWTSDL  +  +Q  G++
Sbjct:  176 PATHPIRLGLALNYSVFFYEILNLPQQACEMAKRAFDDAITEFDNVSEDSYKDSTLIMQLLRDNLTLWTSDLQADQQQQEGGEK 259          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = -3
Query:  313 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEE 546
            ++L PTHPIRLGLALNFSVFYYEI+N  ++AC LAKQAFD++IA+LD + E SYK STLIMQLLRDNL LWTSD  +E
Sbjct:  158 ADLAPTHPIRLGLALNFSVFYYEIMNDADKACQLAKQAFDDSIAKLDEVPESSYKDSTLIMQLLRDNLTLWTSDTADE 235          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.671e-27
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = -3
Query:  304 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGE 543
            E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +LSE+SYK STLIMQLLRDNL LWT+D   EEGGE
Sbjct:  161 EMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGE 241          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.671e-27
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = -3
Query:  304 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGE 543
            E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +LSE+SYK STLIMQLLRDNL LWT+D   EEGGE
Sbjct:  161 EMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADSAGEEGGE 241          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433S_HUMAN (14-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.671e-27
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = -3
Query:  304 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGE 543
            E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +LSE+SYK STLIMQLLRDNL LWT+D   EEGGE
Sbjct:  161 EMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGE 241          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433S_BOVIN (14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.671e-27
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = -3
Query:  304 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD-LPEEGGE 543
            E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +LSE+SYK STLIMQLLRDNL LWT+D   EEGGE
Sbjct:  161 EMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGE 241          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433F_MOUSE5.457e-2980.0014-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 S... [more]
1433F_BOVIN5.457e-2980.0014-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=... [more]
14332_CAEEL9.308e-2980.8214-3-3-like protein 2 OS=Caenorhabditis elegans GN... [more]
143B2_ONCMY2.708e-2870.5914-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss... [more]
1433_NEOCA1.344e-2767.8614-3-3 protein homolog OS=Neospora caninum PE=2 SV... [more]
14333_ENTHI2.994e-2773.0814-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]
1433S_SHEEP6.671e-2775.3114-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]
1433S_MOUSE6.671e-2775.3114-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S... [more]
1433S_HUMAN6.671e-2775.3114-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 S... [more]
1433S_BOVIN6.671e-2775.3114-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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