CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.712e-27
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = -3
Query:  289 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEG---GEQSKGD 540
            LPPT+PI+LGLALN+SVF+YEILN  E+AC +AK AFDEAI ELD+LSEE Y+ STLIMQLLRDNL LWTS   EEG   G++ KGD
Sbjct:  170 LPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLIMQLLRDNLTLWTS--REEGNVMGDEGKGD 254          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14337_ORYSJ (14-3-3-like protein GF14-G OS=Oryza sativa subsp. japonica GN=GF14G PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.138e-26
Identity = 57/81 (70.37%), Postives = 68/81 (83.95%), Query Frame = -3
Query:  304 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGE 546
            ++L PT PIRLGLALN SVFY EI+NSP++AC LAK AFDEA+AEL SLSEE+YK STLIMQLLRDNL LW SD+ ++  +
Sbjct:  161 TDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENYKDSTLIMQLLRDNLALWNSDMADDADD 241          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_ENTHI (14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.138e-26
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = -3
Query:  313 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEE 546
            + L PTHPIRLGLALNFSVFYY+I+N  ++AC LAK+AFDEAI +LD + EESYK STLIMQLLRDNL LWTSD+ ++
Sbjct:  160 ASLVPTHPIRLGLALNFSVFYYQIMNDADKACQLAKEAFDEAIQKLDEVPEESYKESTLIMQLLRDNLTLWTSDMGDD 237          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.138e-26
Identity = 57/78 (73.08%), Postives = 66/78 (84.62%), Query Frame = -3
Query:  313 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEE 546
            +EL PTHPIRLGLALNFSVFY+EI+N  ++AC LAKQAFD+AIA+LD + E  YK STLIMQLLRDNL LWTSD  +E
Sbjct:  161 AELAPTHPIRLGLALNFSVFYFEIMNDADKACQLAKQAFDDAIAKLDEVPENMYKDSTLIMQLLRDNLTLWTSDACDE 238          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.258e-25
Identity = 57/77 (74.03%), Postives = 61/77 (79.22%), Query Frame = -3
Query:  310 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEG 540
            LP THPIRLGLALNFSVF+YEI N   +AC LAK AFD AIAELD L ++SYK STLIMQLLRDNL LW SD   EG
Sbjct:  170 LPTTHPIRLGLALNFSVFFYEIQNDAAKACELAKSAFDSAIAELDQLQDDSYKDSTLIMQLLRDNLTLWASDQTAEG 246          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_ECHGR (14-3-3 protein homolog 2 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.660e-25
Identity = 55/74 (74.32%), Postives = 63/74 (85.14%), Query Frame = -3
Query:  325 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD 546
            +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YK STLIMQLLRDNL LW+S+
Sbjct:  170 AELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWSSE 243          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_ECHMU (14-3-3 protein homolog 2 OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.781e-25
Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = -3
Query:  325 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD 546
            +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YK STLIMQLLRDNL LW S+
Sbjct:  170 AELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSE 243          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_ECHMU (14-3-3 protein homolog 1 OS=Echinococcus multilocularis PE=2 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 4.781e-25
Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = -3
Query:  325 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD 546
            +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YK STLIMQLLRDNL LW S+
Sbjct:  166 AELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSE 239          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_ECHGR (14-3-3 protein homolog 1 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.781e-25
Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = -3
Query:  325 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD 546
            +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YK STLIMQLLRDNL LW S+
Sbjct:  166 AELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSE 239          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 6.461e-22
Identity = 55/80 (68.75%), Postives = 61/80 (76.25%), Query Frame = -3
Query:  304 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGE 543
            E+ PTHPIRLGLALNFSVFYYEILNSPE            AIAELD+L+EESYK STLIMQLLRDNL LWTS+   + G+
Sbjct:  124 EMQPTHPIRLGLALNFSVFYYEILNSPE------------AIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 191          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_ENCCU8.712e-2771.2614-3-3 protein homolog OS=Encephalitozoon cuniculi... [more]
14337_ORYSJ1.138e-2670.3714-3-3-like protein GF14-G OS=Oryza sativa subsp. ... [more]
14332_ENTHI1.138e-2671.7914-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=... [more]
14331_ENTHI1.138e-2673.0814-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
14331_SCHMA1.258e-2574.0314-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
14332_ECHGR3.660e-2574.3214-3-3 protein homolog 2 OS=Echinococcus granulosu... [more]
14332_ECHMU4.781e-2574.3214-3-3 protein homolog 2 OS=Echinococcus multilocu... [more]
14331_ECHMU4.781e-2574.3214-3-3 protein homolog 1 OS=Echinococcus multilocu... [more]
14331_ECHGR4.781e-2574.3214-3-3 protein homolog 1 OS=Echinococcus granulosu... [more]
1433B_SHEEP6.461e-2268.7514-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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