CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:574..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.610e-34
Identity = 69/84 (82.14%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYK STLIMQLLRDNL LWTSD+ EE G++ K
Sbjct:  167 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDINEEAGDEIK 250          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.610e-34
Identity = 72/95 (75.79%), Postives = 81/95 (85.26%), Query Frame = -3
Query:  262 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES*PG 546
            ++L PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELDSL EESYK STLIMQLLRDNL LWTSD  ++GG++ K  E  A   PG
Sbjct:  171 ADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIK--EAAAPKEPG 263          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.255e-33
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = -3
Query:  274 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAE 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K  +   E
Sbjct:  163 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKETKTDNE 253          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.639e-33
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K
Sbjct:  162 TELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 245          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33
Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LA +AFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++GG++ K
Sbjct:  167 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLANEAFDEAIAELDTLEEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEIK 250          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K
Sbjct:  165 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIK 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            ++LP THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFD+AIAELD+L EESYK STLIMQLLRDNL LWTSD  E+GG++ K
Sbjct:  167 ADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIK 250          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K
Sbjct:  165 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIK 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33
Identity = 69/84 (82.14%), Postives = 76/84 (90.48%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ +E  E+ K
Sbjct:  170 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPEEIK 253          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFD+AIAELD+L EESYK STLIMQLLRDNL LWTSD+ +E G++ K
Sbjct:  163 AELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIK 246          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_LILLO9.610e-3482.1414-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14334_ORYSJ9.610e-3475.7914-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
1433B_TOBAC1.255e-3375.8214-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
14332_SOLLC1.639e-3380.9514-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
1433_OENEH2.796e-3379.7614-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14336_SOLLC2.796e-3380.9514-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14336_ORYSJ2.796e-3380.9514-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14335_SOLTU2.796e-3380.9514-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
14334_ARATH2.796e-3382.1414-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14333_ARATH2.796e-3380.9514-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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