CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:574..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.652e-33
Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = -3
Query:  295 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 543
            EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K
Sbjct:  165 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIK 247          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.652e-33
Identity = 67/83 (80.72%), Postives = 76/83 (91.57%), Query Frame = -3
Query:  295 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 543
            EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L EESYK STLIMQLLRDNL LWTSD+ ++GG++ +
Sbjct:  173 ELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEMR 255          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.770e-33
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = -3
Query:  238 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 546
            ++L PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L EESYK STLIMQLLRDNL LW SD+ +E G    GDE++  S    HE +E K
Sbjct:  164 ADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAG----GDEIKEAS---KHEPEEGK 259          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.770e-33
Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = -3
Query:  304 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGE 546
            +EL  THPIRLGLALNFSVFYYEILNSPERACHLAK+AFDEAIAELDSL+E+SYK STLIMQLLRDNL LWTSDL EEGG+
Sbjct:  162 TELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDL-EEGGK 241          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 8.136e-33
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = -3
Query:  289 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 546
            ++LPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+  E  + + GD
Sbjct:  161 NDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEEVDPNAGD 246          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 8.136e-33
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++  ++ K
Sbjct:  164 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIK 247          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.136e-33
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = -3
Query:  301 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQ 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+LSEESYK STLIMQLLRDNL LWTSD+ E+  E+
Sbjct:  167 AELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDPAEE 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.063e-32
Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = -3
Query:  295 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 543
            EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIA++D+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K
Sbjct:  164 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 246          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.388e-32
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L E+SYK STLIMQLLRDNL LWTSD+ ++  E+ K
Sbjct:  168 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDTAEEVK 251          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.388e-32
Identity = 73/96 (76.04%), Postives = 81/96 (84.38%), Query Frame = -3
Query:  259 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES*PGM 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFD+AIAELD+LSE+SYK STLIMQLLRDNL LWTSD+      Q  GD+ Q E  PGM
Sbjct:  160 TELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDVHNMEKNQD-GDDDQNE--PGM 252          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14335_SOLLC3.652e-3381.9314-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]
14331_ORYSJ3.652e-3380.7214-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
14337_ARATH4.770e-3370.8714-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14311_ARATH4.770e-3387.6514-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
1433E_DROME8.136e-3379.0714-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
14332_ARATH8.136e-3379.7614-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
14331_MAIZE8.136e-3382.9314-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
14332_SOLTU1.063e-3279.5214-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
1433_HELAN1.388e-3279.7614-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
1433_DICDI1.388e-3276.0414-3-3-like protein OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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