CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 1.388e-32
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            SEL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++  +  K
Sbjct:  169 SELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDVADDIK 252          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.812e-32
Identity = 71/96 (73.96%), Postives = 78/96 (81.25%), Query Frame = -3
Query:  280 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPE-------EGGEQSKGDEVQ 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFD+AIAELD+L EESYK STLIMQLLRDNL LWTSD  +       EG +Q  GD  Q
Sbjct:  164 AELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTTDDAEDEIREGSKQESGDGQQ 259          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.367e-32
Identity = 73/103 (70.87%), Postives = 80/103 (77.67%), Query Frame = -3
Query:  238 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 546
            +ELPPT P+RLGLALNFSVFYYEIL+SPE ACHLAKQ FDEAI+ELDSLSEESYK STLIMQLLRDNL LWTSD       QS  +E  A +    +EH E K
Sbjct:  162 AELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEY---NQSAKEEAPAAAAASENEHPEPK 261          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.092e-32
Identity = 66/84 (78.57%), Postives = 76/84 (90.48%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            ++L PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYK STLIMQLLRDNL LWTSD+ +  G++ K
Sbjct:  165 ADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIK 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.092e-32
Identity = 71/101 (70.30%), Postives = 82/101 (81.19%), Query Frame = -3
Query:  244 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQE 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYK STLIMQLLRDNL LWTSD  ++      GD+++  S P   E Q+
Sbjct:  165 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNADD-----VGDDIKEASKPESGEGQQ 260          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 3.092e-32
Identity = 67/82 (81.71%), Postives = 74/82 (90.24%), Query Frame = -3
Query:  301 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQ 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+LSEESYK STLIMQLL DNL LWTSD+ E+  E+
Sbjct:  167 AELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDISEDPAEE 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433Z_XENTR (14-3-3 protein zeta OS=Xenopus tropicalis GN=ywhaz PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = -3
Query:  286 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 546
            +E+ PTHPIRLGLALNFSVFYYEILN PE+AC LAK AFDEAIAELD+LSEESYK STLIMQLLRDNL LWTSD   +  EQ +G E
Sbjct:  158 TEMQPTHPIRLGLALNFSVFYYEILNCPEKACSLAKAAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEQGEGGE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 5.273e-32
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = -3
Query:  325 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELDSLSEESYK STLIMQLLRDNL LWTSD
Sbjct:  163 AELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.887e-32
Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = -3
Query:  316 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPE 546
            +ELPPTHPIRLGLALNFSVFYYEILN+P++ACHLAKQAFD+AIAELD+LSEESYK STLIMQLLRDNL LWTS   E
Sbjct:  160 TELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSSEAE 236          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 6.887e-32
Identity = 67/92 (72.83%), Postives = 78/92 (84.78%), Query Frame = -3
Query:  277 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWT--SDLPEEGGEQSKGDEVQA 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RACHLAKQAFD+A+A+L++LSE+SYK STLIMQLLRDNL LWT  S+ P    EQ +  +  A
Sbjct:  162 TELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADLETLSEDSYKDSTLIMQLLRDNLTLWTDLSEAPAATEEQQQSSQAPA 253          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14331_ARATH1.388e-3280.9514-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
14331_SOLTU1.812e-3273.9614-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
RAD25_SCHPO2.367e-3270.87DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433A_SOYBN3.092e-3278.5714-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
14334_SOLLC3.092e-3270.3014-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
14332_MAIZE3.092e-3281.7114-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
1433Z_XENTR4.038e-3278.1614-3-3 protein zeta OS=Xenopus tropicalis GN=ywhaz... [more]
RAD24_SCHPO5.273e-3290.54DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433_TRIHA6.887e-3285.7114-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433_CANAL6.887e-3272.8314-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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