CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:574..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.779e-30
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = -3
Query:  325 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD 546
            +EL PTHPIRLGLALNFSVFYYEILNS +RAC+LAKQAFD+AIAELD+L EESYK STLIMQLLRDNL LWTSD
Sbjct:  165 AELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 238          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 4.936e-30
Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = -3
Query:  304 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGE 546
            +EL PTHPIRLGLALNFSVFYYEILN+ E+AC +AKQAF+EAIAELD++ EESYK STLIMQLLRDNL LWTSD+ E+  E
Sbjct:  168 AELAPTHPIRLGLALNFSVFYYEILNASEKACSMAKQAFEEAIAELDTMGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.446e-30
Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = -3
Query:  304 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGE 546
            +EL PTHPIRLGLALN+SVFYYEILN+ E+AC +AKQAF+EAIAELD+L EESYK STLIMQLLRDNL LWTSD+ E+  E
Sbjct:  168 AELAPTHPIRLGLALNYSVFYYEILNASEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.446e-30
Identity = 62/81 (76.54%), Postives = 73/81 (90.12%), Query Frame = -3
Query:  304 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGE 546
            +++ PTHPIRLGLALNFSVFYYEILNS ++AC++AKQAF+EAIAELD+L EESYK STLIMQLLRDNL LWTSD+ E+  E
Sbjct:  167 ADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_FUCVE (14-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 68/86 (79.07%), Postives = 75/86 (87.21%), Query Frame = -3
Query:  289 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTL-IMQLLRDNLPLWTSDLPEEGGEQSKGD 543
            +LPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+LSEESYK STL IMQLLRDNL LWTSD  E   E++ G+
Sbjct:  159 DLPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKAAFDDAIAELDTLSEESYKDSTLIIMQLLRDNLTLWTSDQGE--AEEAPGN 242          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433T_XENLA (14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTSD   E  + ++G E
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTSD   E  + ++G E
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTSD   E  + ++G E
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433T_PONAB (14-3-3 protein theta OS=Pongo abelii GN=YWHAQ PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTSD   E  + ++G E
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433T_MOUSE (14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTSD   E  + ++G E
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433E_TOBAC3.779e-3086.4914-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
14331_SOLLC4.936e-3077.7814-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
1433D_TOBAC6.446e-3077.7814-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14336_ARATH6.446e-3076.5414-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
1433_FUCVE8.419e-3079.0714-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1[more]
1433T_XENLA8.419e-3075.5814-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE... [more]
1433T_RAT8.419e-3075.5814-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq... [more]
1433T_RABIT8.419e-3075.5814-3-3 protein theta OS=Oryctolagus cuniculus GN=Y... [more]
1433T_PONAB8.419e-3075.5814-3-3 protein theta OS=Pongo abelii GN=YWHAQ PE=2... [more]
1433T_MOUSE8.419e-3075.5814-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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