CB305130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_SULTO (Translation initiation factor 6 OS=Sulfolobus tokodaii GN=eif6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = -3 Query: 234 VVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVE-VFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVF 626 V V+ ++ R +ALGN I N + AL + +L + I + L ++ + + +IA I VGS +++ GLVH T+ E+LD+LS L +V + GTVN GS I +GL N GS TT E+ I+ F Sbjct: 90 VRVEILDIRPTALGNIILTNSYGALIYPELSSIEFKKIKESLQIDNIEKGSIANIITVGSVGVITDKAGLVHIDTTEEELDKLSKLFRVKIDTGTVNFGSAFIHSGLIANRNGVLVGSATTGPEILRIQRAF 221
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_NATPD (Translation initiation factor 6 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.748e-12 Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = -3 Query: 243 VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 620 V + ++A GN + N+ A H DL R+ I + L V V R IA VG+ ++ G L HP T+ E LD L L V GT+N G ++ +GL N+ G +TT EL IE Sbjct: 89 VVELPGNINAAGNVVLANNEGAFVHPDLSRDALSAIEEALSVPVERGRIADVQTVGTAAVVTDDGVLSHPKTTDEKLDFLEELFGVYADIGTINYGGPLVGSGLVANNTGYIAGEETTGPELGRIE 214
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_METJA (Translation initiation factor 6 OS=Methanocaldococcus jannaschii GN=eif6 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.748e-12 Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -3 Query: 228 VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVA-GTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKL 620 V+ I+ + +ALGN I ND AL +L ++ ++ I D L VEV TIA VGS +N+G L HP ++L+ L +L +V + GT N+G+ + A + N A G DTT EL +IE L Sbjct: 97 VEIIKSKNTALGNLILTNDKGALISPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLFKVEYIGKGTANKGTTSVGACIIANSKGAVVGGDTTGPELLIIEDALGL 227
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_STAMF (Translation initiation factor 6 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif6 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11 Identity = 36/114 (31.58%), Postives = 60/114 (52.63%), Query Frame = -3 Query: 255 SALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATEL 596 +ALGN + CN+ + ++L+R+ I++ LGVE + I + GS +++GG++HP S ++ EL + +V TVN G I +GL N+ G TT E+ Sbjct: 102 TALGNILLCNNKACIAGSELERQELNKISEALGVEALYKDIMNLTIPGSLAVVTDKGGVIHPDISDDENRELKEIFKVAFERATVNSGIPFIKSGLIANNKGIIVGEYTTGPEI 215
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_THEPD (Translation initiation factor 6 OS=Thermofilum pendens (strain Hrk 5) GN=eif6 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11 Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = -3 Query: 234 VVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVF 626 VV++ + E + +GN + ND+ + L + + IAD LGVE + +I VGS +NRG + P + E++ + L+V TVNRG + GL N A G DTT E+ ++ +F Sbjct: 93 VVLEDVRE--TGIGNLVLANDNGCVASQILPKSAVDRIADALGVECIQMSIGDVPFVGSLSVATNRGVALPPLATEEEIKSVEEALKVKANVLTVNRGKMFLRTGLVANSKGALVGEDTTGHEMMQLQRIF 221 The following BLAST results are available for this feature:
BLAST of CB305130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305130 ID=CB305130; Name=CB305130; organism=Citrus sinensis; type=EST; length=640bpback to top |