CB322093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322093 vs. ExPASy Swiss-Prot
Match: PSBA4_ANAVT (Photosystem Q(B) protein 6 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psbA5 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.938e-43 Identity = 77/113 (68.14%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 3 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGIS 341 EP+ GSL+ GNN+I+ A++PTSAAIGLHFYPIWEAAS+DEWLYNGGPY+LIVLHFL+G+ C +GR WELS+RLGMRPWI L+YPIGQGSFSDG+PLGI+ Sbjct: 68 EPIMGSLMDGNNLITAAVVPTSAAIGLHFYPIWEAASMDEWLYNGGPYQLIVLHFLIGIWCLLGRFWELSYRLGMRPWIAVAYSAPVIAATSVLLVYPIGQGSFSDGLPLGIA 180
BLAST of CB322093 vs. ExPASy Swiss-Prot
Match: PSBA_HETRO (Photosystem Q(B) protein OS=Heterocapsa rotundata GN=psbA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.640e-42 Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 3 Query: 3 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGIS 341 EPV+G+LLYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+ G +MGREWE +FRLGMRPWI F++YPIGQGSFSDGMPLGIS Sbjct: 69 EPVAGALLYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFIFGAGAWMGREWEFAFRLGMRPWIFVAFSAPLVASCAVFVVYPIGQGSFSDGMPLGIS 181
BLAST of CB322093 vs. ExPASy Swiss-Prot
Match: PSBA_AMPOP (Photosystem Q(B) protein OS=Amphidinium operculatum GN=psbA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.772e-42 Identity = 75/112 (66.96%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 3 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGI 338 EPV+GSL+YGNNIISGA+IP+S AIG+HFYP+WE+ +DEWLYNGG Y+ +V HF LGV +MGREWE S+RLGMRPWI F+IYPIGQGSFSDGMPLGI Sbjct: 61 EPVAGSLIYGNNIISGAVIPSSNAIGVHFYPLWESLGLDEWLYNGGTYQFVVFHFFLGVCGWMGREWEFSYRLGMRPWIFVAFSAPIAAAAAVFIIYPIGQGSFSDGMPLGI 172
BLAST of CB322093 vs. ExPASy Swiss-Prot
Match: PSBA_AMPCA (Photosystem Q(B) protein OS=Amphidinium carterae GN=psbA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.772e-42 Identity = 75/112 (66.96%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 3 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGI 338 EPV+GSL+YGNNIISGA+IP+S AIG+HFYP+WE+ +DEWLYNGG Y+ +V HF LGV +MGREWE S+RLGMRPWI F+IYPIGQGSFSDGMPLGI Sbjct: 61 EPVAGSLIYGNNIISGAVIPSSNAIGVHFYPLWESLGLDEWLYNGGTYQFVVFHFFLGVCGWMGREWEFSYRLGMRPWIFVAFSAPIAAAAAVFIIYPIGQGSFSDGMPLGI 172
BLAST of CB322093 vs. ExPASy Swiss-Prot
Match: PSBA_ALETA (Photosystem Q(B) protein OS=Alexandrium tamarense GN=psbA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.813e-41 Identity = 76/113 (67.26%), Postives = 90/113 (79.65%), Query Frame = 3 Query: 3 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGIS 341 EPV+GSLLYGNNIISGA+IP+S AIG+HFYP WE+A++ EWLYNGG Y+ +VLHF+ GV+ +MGREWE SFRLGMRPWI F+ YPIGQGSFSDGMPLG+S Sbjct: 67 EPVAGSLLYGNNIISGAVIPSSNAIGVHFYPEWESATLLEWLYNGGTYQFVVLHFIGGVSSWMGREWEFSFRLGMRPWIYLAFSAPLVAATAVFVFYPIGQGSFSDGMPLGVS 179
BLAST of CB322093 vs. ExPASy Swiss-Prot
Match: PSBA_PROMC (Photosystem Q(B) protein OS=Prorocentrum micans GN=psbA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.005e-40 Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 3 Query: 3 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGIS 341 EPVSGSLLY NNII+GA+IP+S AIG+HFYP+WEA S +EWLYNGG Y+ +VLHFL V ++GRE+E SFRLGMRPWI F++YPIGQGSFSDGMPLGIS Sbjct: 64 EPVSGSLLYSNNIITGAVIPSSNAIGVHFYPVWEAISNNEWLYNGGTYQFVVLHFLAAVLAWLGREYEYSFRLGMRPWIYLAFSAPVVAASAVFVVYPIGQGSFSDGMPLGIS 176
BLAST of CB322093 vs. ExPASy Swiss-Prot
Match: PSBA1_ACAM1 (Photosystem Q(B) protein 1 OS=Acaryochloris marina (strain MBIC 11017) GN=psbA1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 3.420e-40 Identity = 71/113 (62.83%), Postives = 89/113 (78.76%), Query Frame = 3 Query: 3 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGIS 341 EP+ SLL G+N+I+ A+IPTSAAIGLH YP+WEA S+DEWLYNGGPY+LI+LHFL+ + Y+GR+WELS+RLGMRPWI L+YP+GQGSFS+G+PLGIS Sbjct: 68 EPIISSLLGGSNVITAAVIPTSAAIGLHLYPLWEATSMDEWLYNGGPYQLIILHFLIAIWTYLGRQWELSYRLGMRPWIAMAFSAPVAAATAVLLVYPMGQGSFSEGLPLGIS 180 The following BLAST results are available for this feature:
BLAST of CB322093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322093 ID=CB322093; Name=CB322093; organism=Citrus sinensis; type=EST; length=343bpback to top |