CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_DEHE1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Dehalococcoides ethenogenes (strain 195) GN=dxs PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 9.655e-41 Identity = 90/196 (45.92%), Postives = 122/196 (62.24%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A++G P IYS+FLQR +DQ++HDV LQKLPV FA+DR G+VG DG TH G FD++FMS +P+M+V APSDE +L H++ T AV +P R+PRG G G + P IG+ +L G +AI G V A +L I T+ + R+ PLDT+LI ++A H+ LITVEE + GG GS Sbjct: 387 MATQGYIPVVVIYSTFLQRSFDQIIHDVCLQKLPVVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMIVTAPSDENDLQHLLYT-AVNSGKPFALRYPRGFGEGVETEGTLRNIP--IGENEVLASGSEIAIFATGKSVAFAKEAMEILAESGIKPTLVNNRYISPLDTELILKIAGNHKYLITVEENVLSGGLGS 579
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PARD8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dxs PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.261e-40 Identity = 83/196 (42.35%), Postives = 124/196 (63.27%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA EG+ PFC +YSSF+QR YD V+HDV LQKL + +DRAGLVG DG TH G FD+ ++ +PN+V+ +P +E +L +++ T D P R+PRG G + N+ L IGKG+ L +GD +A+L G + + + A M+K + +S+ D + KPLD +L+ ++ ++ +ITVE G + GGFGS Sbjct: 387 LAKEGMIPFCNVYSSFMQRAYDMVIHDVALQKLHMVICLDRAGLVGEDGATHHGVFDLAYLRPIPNLVIASPLNELDLRNLMYTGYAAFDGPFVIRYPRGK--GEMKDWRNEMQVLPIGKGKKLRDGDDIAVLSIGPIGNEVIKAIEMVKEERVSIAHYDMIYLKPLDEELLHEIGQKYNRIITVENGVIKGGFGS 580
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_BLOFL (1-deoxy-D-xylulose-5-phosphate synthase OS=Blochmannia floridanus GN=dxs PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.261e-40 Identity = 88/199 (44.22%), Postives = 124/199 (62.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPL---EIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 LA G KP AIYS+FLQR YDQ++HD+ +QKLPV FA+DR G+VG+DG TH GAFD++++ C+PN+++M PS+ E M+ T PS R+P+G +L P N T L + KG I +G +AIL +G++++ A L + T+ D RF KPLD LI++L H+ IT+EE S +GG GS Sbjct: 370 LAIAGYKPVVAIYSTFLQRAYDQIIHDIAIQKLPVLFAVDRGGIVGSDGETHQGAFDLSYLRCIPNLIIMTPSNAYECKLMLHTGYHYQYGPSVVRYPKGCATNNILYPYNNTTSLYSIPLSKGIIHHQGQHIAILNFGTLLKPAYNVALQL-----NATLVDMRFVKPLDEMLIKKLTENHQAFITLEENSIIGGAGS 563
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ALCBS (1-deoxy-D-xylulose-5-phosphate synthase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dxs PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.647e-40 Identity = 94/196 (47.96%), Postives = 126/196 (64.29%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA E KP AIYS+FLQRGYDQ++HDV LQ+L V F +DRAGLVG DG TH G FD+ ++ +PNM++ APSDE E ++ +A + P+ R+PRG G GA + T L IG+ R L EG +VAIL +G++V + AA L + TV D R+ KPLD D I + A +H +L+TVE+ +GG GS Sbjct: 394 LACENQKPVVAIYSTFLQRGYDQLIHDVALQELDVTFGLDRAGLVGEDGATHGGVFDLAYLRTVPNMIIAAPSDENECRQLL-YSAYQHEGPAAVRYPRGTGPGATI--EQTMTALPIGQSRTLREGLQVAILAFGAMVPAALEAAIPL-----NATVIDMRWVKPLDRDAILRAAAQHTLLVTVEDHQQMGGAGS 581
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SACD2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dxs PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.809e-40 Identity = 88/192 (45.83%), Postives = 121/192 (63.02%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 LA E KP AIYS+FLQR YDQ+VHDV LQ L V FA+DRAGLVG DGPTH GAFDI+F+ C+P +++ PSDE E ++ +A + R+PRG G GAV+ N+ P IGKGR L +G V + +G ++ + A + + V D R+ KPLD DL+ +A +++ L+T+EE +V G Sbjct: 395 LACEKFKPVVAIYSTFLQRAYDQLVHDVALQNLDVTFAIDRAGLVGEDGPTHAGAFDISFLRCIPKIIIATPSDENECRQLL-FSAYHHPGAAAVRYPRGTGPGAVIELENQHWP--IGKGRELRQGKTVCFINFGVLLPDAIAVA-----EANNYGVCDMRWAKPLDKDLLLNMAEQYDYLVTLEENAVAG 578
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dxs PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.792e-40 Identity = 87/196 (44.39%), Postives = 128/196 (65.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFG 582 +A+EG+KPF A+YS+FLQR YDQV+HDV +QKLPV +DRAGLVG DG TH G FDI+F+S +PNM ++AP E M ++ A + P R+PRG I L P +K +E GK + EGD++AI+ G +VQ ++AA +K + +I + + +A F KP+D +L+ L+ + ++T+E+ GGFG Sbjct: 375 MAAEGLKPFFAVYSTFLQRAYDQVLHDVCIQKLPVTLCLDRAGLVGEDGETHQGIFDISFLSPMPNMTIVAPKCIDE-MEVILKWASNFNAPLAIRYPRGGDIDVNLKPLSK---IEYGKWEKVQEGDKIAIVATGKMVQHAMIAAQKIKEEKNIDILIINATFIKPIDKELLNSLSKDGFKIVTIEDNIKKGGFG 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOPE (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens GN=dxs PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39 Identity = 86/196 (43.88%), Postives = 128/196 (65.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFG 582 +A+EG+KPF A+YS+FLQR YDQV+HDV +QKLPV +DRAGLVG DG TH G FDI+F+S +PNM ++AP E M ++ A + P R+PRG I L P +K +E GK + EG+++AI+ G +VQ ++AA +K + +I + + +A F KP+D +L+ L+ + ++T+E+ GGFG Sbjct: 375 MAAEGLKPFFAVYSTFLQRAYDQVLHDVCIQKLPVTLCLDRAGLVGEDGETHQGIFDISFLSPMPNMTIVAPKCIDE-MEVILKWASNFNAPLAIRYPRGGDIDVNLKPLSK---IEYGKWEKVQEGEKIAIVATGKMVQHAMIAAQKIKEEKNIDILIINATFIKPIDKELLNSLSKDGFKIVTIEDNIKKGGFG 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_LISMF (1-deoxy-D-xylulose-5-phosphate synthase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dxs PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39 Identity = 87/196 (44.39%), Postives = 123/196 (62.76%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA++G+KPF IYS+FLQR YDQ+VHDV QKL V +DRAGLVGADG TH G FDI+F++ +PNM + P DE E ++ TA +D P R+PRG GA + +N T + IGK +++ IL +G ++ + AA L+ + V V +AR+ KPLD L+ Q+ + ++TVEE + GGFG+ Sbjct: 352 LATQGMKPFLTIYSTFLQRAYDQLVHDVCRQKLNVVIGIDRAGLVGADGETHQGIFDISFLNSIPNMTISMPKDEVEARQLMDTAFSYNDGPFAIRYPRGEAPGAQVAESN--TLIPIGKWETIIQPIDAVILTFGPTIRLALKAAEQLELEGYHVGVINARYIKPLDEALLHQILKQKIPILTVEESLLKGGFGA 545
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_LISMC (1-deoxy-D-xylulose-5-phosphate synthase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dxs PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39 Identity = 87/196 (44.39%), Postives = 123/196 (62.76%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA++G+KPF IYS+FLQR YDQ+VHDV QKL V +DRAGLVGADG TH G FDI+F++ +PNM + P DE E ++ TA +D P R+PRG GA + +N T + IGK +++ IL +G ++ + AA L+ + V V +AR+ KPLD L+ Q+ + ++TVEE + GGFG+ Sbjct: 352 LATQGMKPFLTIYSTFLQRAYDQLVHDVCRQKLNVVIGIDRAGLVGADGETHQGIFDISFLNSIPNMTISMPKDEVEARQLMDTAFSYNDGPFAIRYPRGEAPGAQVAESN--TLIPIGKWETIIQPIDAVILTFGPTIRLALKAAEQLELEGYHVGVINARYIKPLDEALLHQILKQKIPILTVEESLLKGGFGA 545
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ALKOO (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkaliphilus oremlandii (strain OhILAs) GN=dxs PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.056e-39 Identity = 87/198 (43.94%), Postives = 125/198 (63.13%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILM-EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSL 588 LA+ G KPF A+YS+F QR YDQV+HD +Q LPV + +DRAGLVG DG TH G+ DI+F+SC+PN+ MAP D EL MV AA + P R+PRG+ + + +PL +GKG I G+ V IL G+ + + L+ +I T+ + RF KP+D +LI ++ +H+I+ T+E+ S +GGFG+L Sbjct: 377 LAANGFKPFFAVYSTFFQRAYDQVIHDACIQDLPVTYLIDRAGLVGNDGETHHGSLDISFLSCIPNLTFMAPKDGIELSEMVRFAAK-HNGPVAIRYPRGH---SNMDSQENFSPLALGKGEITYHSGNDVLILALGTFNKMGLEICKDLEENNIFSTLMNPRFIKPMDEELIVEMVQKHKIIYTIEDNSKIGGFGTL 570 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |