CB322119

Overview
NameCB322119
Unique NameCB322119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26
Identity = 75/186 (40.32%), Postives = 104/186 (55.91%), Query Frame = 2
Query:  149 KFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVG-TEVDPRTKGPKKSREAVLKDWSKK-SNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            K K   VL  K  ++ +   + V   D L   +GR+V L+L+  T+ D   KG K  ++  L+  +     + A    +   F  D + G PGA  + N  Q EFFL+++T+E  +  G + F CNSWV +TK +   RIFFAN  Y+PSETP  L + RE+ELK +RG G G RK  DRIYDYDV
Sbjct:    7 KIKGTVVLMPKNELEVNPDGSAV---DNLNAFLGRSVSLQLISATKADAHGKG-KVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDV 188          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25
Identity = 75/185 (40.54%), Postives = 103/185 (55.68%), Query Frame = 2
Query:  167 VLTVKKNIKE--DFKETLVNQ-FDVLTEKIGRNVVLELVGTEVDPRTKG--PKKSREAVLKD--WSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            V+ + KN+ +  D   +L  + FDVL +K+   ++  + G   DP T G   K S  A L++  ++           +   F  +  FG PGA  + N H  EFFL+++T+E     G VHF CNSWV  + ++   RIFFANQPYLPSETP  LR  RE EL  +RG G G R+  DRIYDYD+
Sbjct:   23 VVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQG---DP-TNGLQGKHSNPAYLENSLFTLTPLTAGSETAFGVTFDWNEEFGVPGAFIIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSLNYKSDRIFFANQPYLPSETPELLRKYRENELLTLRGDGTGKREAWDRIYDYDI 203          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.572e-25
Identity = 89/231 (38.53%), Postives = 129/231 (55.84%), Query Frame = 2
Query:   50 VRRGINNPVAALSEDLVKGAASTAVPGAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQF------DVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERV-HYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIE-GFACGP---VHFQCNSWVQ--STKDH--PGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            VR   ++  ++ SE   +G  S+ +  AA      KV+AV T+K  +     E L+N        D + + IGR++ LELV +E++ +T G KK   A +  ++ K +     V  Y A+F V + FG  GA+ V N+  +E FLE + +  G   G    +  +CNSWVQ  S+ D   PGKRIFFA + YLP +TP GLR+ RE++LK  RG G G R+  DR+YDYDV
Sbjct:   66 VRCASSSAASSASEAARRGTGSSDMAPAAV----VKVKAVATIKVTV-----EGLLNSLRPSKAIDNIRDLIGRSLFLELVSSELEAKT-GKKK---ATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGLRSYREEDLKQKRGNGAGQREADDRVYDYDV 282          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25
Identity = 68/160 (42.50%), Postives = 91/160 (56.88%), Query Frame = 2
Query:  227 DVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKS--NVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            D LT  +GR+V L+L+     P   G  K  +    +    S   + A    +  +F  D + G PGA  + N  Q EF+L+++T+E     G + F CNSWV +TK +   RIFFAN  Y+PSETP  L   RE+ELK++RG GKG RK  DRIYDYDV
Sbjct:   60 DNLTAFLGRSVALQLISA-TKPLANGKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWDESMGIPGAFYIKNYMQVEFYLKSLTLEDVPNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAALVGYREEELKNLRGDGKGERKEHDRIYDYDV 218          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25
Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  377 YTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            Y   F  DS+FG PGA  + N  Q EF+L+++ +E     G +HF CNSWV ++K++   RIFFAN  YLPSETP  L   RE+ELK++RG G G RK  DRIYDYDV
Sbjct:   95 YDVNFEWDSDFGIPGAFYIKNFMQNEFYLKSLILEDIPNHGTIHFVCNSWVYNSKNYKTDRIFFANNTYLPSETPAPLLKYREEELKNVRGDGTGERKEWDRIYDYDV 202          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25
Identity = 72/182 (39.56%), Postives = 101/182 (55.49%), Query Frame = 2
Query:  158 VRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVG-TEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            + ++ TV   I + F + L +  D LT  +GR+V L+L+  T+ D   KG       +    S    + A +  +   F  D + G PGA  + N  Q EFFL ++T++     G ++F CNSW+ + K H   RIFFANQ YLPSETP  L   RE+EL ++RG G G RK  +RIYDYDV
Sbjct:   29 INSLTTVGGVIGQGF-DILGSTVDNLTAFLGRSVSLQLISATKPDATGKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWDDDMGIPGAFYIKNFMQTEFFLVSLTLDDIPNHGSIYFVCNSWIYNAKHHKIDRIFFANQTYLPSETPAPLVHYREEELNNLRGDGTGERKEWERIYDYDV 209          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 69/160 (43.12%), Postives = 94/160 (58.75%), Query Frame = 2
Query:  227 DVLTEKIGRNVVLELVG-TEVDPRTKGPKKSREAVLKD-WSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            D LT  +GR+V L+L+  T+ D   KG K  ++  L+   +    + A    +   F  D   G PGA  + N  Q EFFL+++T+E     G + F CNSWV ++K +   RIFFAN+ YLPSETP  L   RE+EL+ +RG G G RKL +RIYDYDV
Sbjct:   56 DGLTAFLGRSVSLQLISATKSDANGKG-KVGKDTFLEGVLASLPTLGAGESAFNIHFEWDHEMGIPGAFYIKNYMQVEFFLKSLTLEDVPNHGTIRFVCNSWVYNSKLYKSPRIFFANKSYLPSETPSPLVKYREEELQTLRGDGTGERKLHERIYDYDV 214          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 66/160 (41.25%), Postives = 91/160 (56.88%), Query Frame = 2
Query:  227 DVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVH-YTAEFLVDSNFGTPGAITVANKHQK-EFFLETITIEGFA-CGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            D  T  +GR+V L L+   V   +   K S+EA L+          ++   ++  F  DSN GTPGA  + N  Q  EFFL ++T++     G + F CNSW+ + K +   RIFFAN+ YLPS TP  L + R++ELK +RG G G R+  DRIYDYDV
Sbjct:   55 DTATAFLGRSVRLRLISATVADASGKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWDSNMGTPGAFYIENFMQGGEFFLVSLTLDDVPNVGSIKFACNSWIYNDKKYQSDRIFFANKTYLPSATPAPLVSYRQEELKTLRGDGTGERQEWDRIYDYDV 214          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24
Identity = 63/159 (39.62%), Postives = 87/159 (54.72%), Query Frame = 2
Query:  227 DVLTEKIGRNVVLELVG-TEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            D  T    RN+ ++L+  T+ D    G    +  + K      N+   +  +   F  D NFG P A  + N  Q EFFL ++T+E     G +HF CNSWV + K +   RIFFAN+ YLP+ETP  L   R++EL+++RG G G RK  DRIYDY V
Sbjct:   56 DGATAIFSRNIAIQLISATKTDGLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWDENFGIPEAFYIKNFMQSEFFLVSLTLEDIPNHGTIHFVCNSWVYNAKSYKRDRIFFANKTYLPNETPASLVKYRKEELENLRGDGTGERKEYDRIYDYAV 214          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 77/231 (33.33%), Postives = 113/231 (48.92%), Query Frame = 2
Query:    8 QQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASTAVPGAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITI--EGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYD 694
            QQRR        +G R        A +E+ V    ST+V     K     V A++T +          L    D + +  G+ ++LELV +E+DP+T G ++ R       + K         Y A+  V ++FG  GA+ V N+H +E F++ I +   G     + F   SWV S  D P  R FF  + YLPS+TP G+ ALR+KEL+ +RG G   RK  +R+YDYD
Sbjct:   27 QQRRASGAGRTCSGRRLSARRISCASTEEAV--GVSTSV---TTKERALTVTAIVTAQVPTSVYVARGL----DDIQDLFGKTLLLELVSSELDPKT-GRERERVKGFAHMTLKEGT------YEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGDESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGIEALRKKELETLRGDGHSERKFHERVYDYD 241          
The following BLAST results are available for this feature:
BLAST of CB322119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX1_SOYBN9.218e-2640.32Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 ... [more]
LOX1_SOLTU1.204e-2540.54Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2... [more]
LOXC2_ORYSJ1.572e-2538.53Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOX2_SOYBN2.682e-2542.50Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOX4_SOYBN5.975e-2552.78Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]
LOX3_PEA5.975e-2539.56Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=... [more]
LOX2_PEA1.019e-2443.13Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=... [more]
LOX1_LENCU3.873e-2441.25Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1[more]
LOXA_PHAVU6.606e-2439.62Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 ... [more]
LOX23_HORVU2.510e-2333.33Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]

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Properties
Property NameValue
Genbank descriptionEST0230 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB100 similar to lipoxygenase (acc# CAC43237), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322119 ID=CB322119; Name=CB322119; organism=Citrus sinensis; type=EST; length=697bp
ACCCGTGCAACAGAGAAGAGTGCATTCGAGGAAAGCAGGAGCAGCAGGTG
TGAGGAGGGGGATTAATAATCCTGTGGCTGCTCTAAGTGAAGATTTGGTA
AAAGGAGCTGCTTCCACTGCCGTGCCCGGGGCTGCTGAAAAGCCAGTGAA
GTTTAAGGTGAGGGCTGTGCTGACGGTGAAGAAGAACATCAAAGAAGATT
TCAAAGAGACCCTTGTTAATCAGTTTGATGTTTTAACTGAAAAGATTGGC
AGAAATGTCGTTCTGGAACTTGTCGGCACTGAAGTTGATCCCAGAACAAA
GGGACCAAAGAAAAGCAGAGAAGCAGTTCTGAAGGATTGGTCAAAGAAAT
CAAATGTTAAGGCTGAACGGGTCCATTACACGGCTGAATTTTTAGTGGAC
TCAAATTTTGGGACGCCTGGTGCAATCACAGTTGCCAATAAGCACCAAAA
GGAATTCTTTTTGGAAACTATTACCATTGAAGGTTTTGCTTGTGGCCCTG
TTCATTTCCAATGCAATTCTTGGGTTCAATCCACAAAAGATCATCCTGGA
AAAAGGATATTCTTCGCTAATCAGCCATATTTACCAAGTGAGACGCCAGT
TGGGCTTAGAGCACTAAGGGAGAAAGAGCTCAAAGACATCAGAGGCACAG
GCAAAGGAGTTAGAAAATTATCGGACAGAATTTATGACTATGATGTG
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