CB322136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.971e-11 Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQI 71
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.971e-11 Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQI 69
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.575e-11 Identity = 32/65 (49.23%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ K+ V + +K++ KL++ +S +F I Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVK-RGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQI 72
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.575e-11 Identity = 32/58 (55.17%), Postives = 47/58 (81.03%), Query Frame = 3 Query: 108 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 281 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ KD V ++++KKV +L++ TS+ Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVK-KGSTALGIKFKDGVALISEKKVRSRLVEKTSL 64
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.363e-11 Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR IT+FSP+GRL+QVEYA +AVK G T++G++ + V ++ K+V +LL+ S+ +F I Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVK-RGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKI 71
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.392e-11 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ KD V + +K++ +L++ S +F I Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVK-RGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQI 72
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.392e-11 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR IT+FSP+GRLFQVEYA +AVK G TSIG++ + + + K+ L++ TS+ +F I Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKI 71
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.736e-11 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLI 72
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.736e-11 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLI 72
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.736e-11 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPI 299 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLI 72 The following BLAST results are available for this feature:
BLAST of CB322136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322136 ID=CB322136; Name=CB322136; organism=Citrus sinensis; type=EST; length=305bpback to top |