CB322146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322146 vs. ExPASy Swiss-Prot
Match: ATPG_AZOC5 (ATP synthase gamma chain OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.195e-11 Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 269 STQIVRNRMKSVKNIQKITKAMKMVTASKLRAIQVKAENSRGLWQPFTALLG----------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEK 589 S + +RNR+ SVK QKITKAM+MV A+KLR Q+ AE +R + ++LG DTP T +K++++ +S++GLCG N+ V+ + L G K+ K+ +G K Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQMAAEAARPYAERMDSVLGNIASGVTLSADTPLLLSGTGKDEKHLLLVCTSERGLCGAFNTNIVRAVRERANLLIGQGKDVKFFCVGRK 124
BLAST of CB322146 vs. ExPASy Swiss-Prot
Match: ATPG_HALOH (ATP synthase gamma chain OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=atpG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.867e-11 Identity = 42/118 (35.59%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 281 VRNRMKSVKNIQKITKAMKMVTASKLRAIQVKAENSRGLWQPFTALLGDT----------PTVDAKKN---VIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAK 595 ++ R+ S+KN QKITKAMKMV A+KL+ Q+KAEN+R ++ ++L D P + K+N + V I++D+GLCG N+ ++ + KL D+ N ++ +G K + Sbjct: 7 IKRRINSIKNTQKITKAMKMVAAAKLKKAQLKAENARPFFEKTRSILIDVARRTRQKDIHPLLREKENNRSLFVMITADRGLCGAYNA---RVIDRVKKLTEKEDEVN-FLAVGRKGR 120
BLAST of CB322146 vs. ExPASy Swiss-Prot
Match: ATPG_HUMAN (ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.745e-11 Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 257 VRSIST-QIVRNRMKSVKNIQKITKAMKMVTASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAIL 604 VR+++T + + R+KS+KNIQKITK+MKMV A+K + + + +R AL D KK++++ +SSD+GLCG I+S+ K KS + KE V +G+K + IL Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGIL 141
BLAST of CB322146 vs. ExPASy Swiss-Prot
Match: ATPG_PONAB (ATP synthase subunit gamma, mitochondrial OS=Pongo abelii GN=ATP5C1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 257 VRSIST-QIVRNRMKSVKNIQKITKAMKMVTASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAIL 604 VR+++T + + R+KS+KNIQKITK+MKMV A+K + + + +R AL D KK++++ +SSD+GLCG I+S+ K KS + KE V +G+K + IL Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGVGDKIRGIL 141
BLAST of CB322146 vs. ExPASy Swiss-Prot
Match: ATPG_PHEZH (ATP synthase gamma chain OS=Phenylobacterium zucineum (strain HLK1) GN=atpG PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 269 STQIVRNRMKSVKNIQKITKAMKMVTASKLRAIQVKAENSRGLWQPFTALLGD--------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAK 595 S + +RNR+ SVK QKITKAM+MV A+KLR Q A+N+R Q +++ + T +++++V +SD+GL GG NS V+ ++ S K+ + + +G KA+ Sbjct: 3 SLKEMRNRIGSVKATQKITKAMQMVAAAKLRKAQDAAQNARPYAQRMASVIANLAAGVSGDGAPKLLAGTGSDRRHLVVVATSDRGLAGGFNSAIVRAARERINALSAEGKDVRVITIGRKAR 125
BLAST of CB322146 vs. ExPASy Swiss-Prot
Match: ATPG_METNO (ATP synthase gamma chain OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=atpG PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 269 STQIVRNRMKSVKNIQKITKAMKMVTASKLRAIQVKAENSRGLWQPFTALLG----------DTPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAIL 604 S + +RNR+ SVK QKITKAM+MV A+KLR Q AEN+R + A+LG +TP + A + +++V ++++GLCG NS+ ++++ + K K + +G+K IL Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTPGAETPRLLAGTGADRVHLLVVCTAERGLCGAFNSSIARLARDHARRLVAEGKTVKIICVGKKGYDIL 129 The following BLAST results are available for this feature:
BLAST of CB322146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322146 ID=CB322146; Name=CB322146; organism=Citrus sinensis; type=EST; length=605bpback to top |