CB322149

Overview
NameCB322149
Unique NameCB322149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 2.442e-65
Identity = 125/155 (80.65%), Postives = 133/155 (85.81%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF DA VQ DMK WPF V+   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   16 SCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 2.442e-65
Identity = 125/155 (80.65%), Postives = 133/155 (85.81%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF DA VQ DMK WPF V+   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   16 SCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGEAKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 2.442e-65
Identity = 125/155 (80.65%), Postives = 133/155 (85.81%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF DA VQ DMK WPF V+   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   16 SCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 3.189e-65
Identity = 121/155 (78.06%), Postives = 135/155 (87.10%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGVWQ++RVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNPTNTVFDAKRLIGR+FSD+ VQ DMK WPFKV+    DKP+I V ++GE K F  EEISSMVL+KM+E+AE+YLG  +  AVVTVPAYFNDSQRQATKDAG IAGL V
Sbjct:   16 SCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFRGETKTFNPEEISSMVLLKMKEVAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEV 170          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 3.189e-65
Identity = 122/155 (78.71%), Postives = 134/155 (86.45%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCV VWQ+DRVE+IANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F DA VQ DMK WPF+V      KP I + YKGE+K F  EEISSMVL+KMRE AEAYLG T+K+AVVTVPAYFNDSQRQATKDAG+I+GLNV
Sbjct:   14 SCVAVWQNDRVEVIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDAEVQSDMKHWPFEV-TSVGGKPQIRIEYKGEKKTFTPEEISSMVLLKMRETAEAYLGGTVKDAVVTVPAYFNDSQRQATKDAGIISGLNV 167          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 3.189e-65
Identity = 121/155 (78.06%), Postives = 134/155 (86.45%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGVW HDRVE+IANDQGNRTTPSYV FT+TERLIGD+AKNQVAMNP NTVFDAKRLIGRRF D +VQ D+K +PFKVI    DKP + V YKGE K FA EEISSMVL+KM+EIAE++LG  +KNAV+TVPAYFNDSQRQATKDAG I GLNV
Sbjct:   19 SCVGVWLHDRVEVIANDQGNRTTPSYVAFTETERLIGDSAKNQVAMNPDNTVFDAKRLIGRRFQDPAVQEDVKPFPFKVICKDGDKPAVEVKYKGETKIFAPEEISSMVLLKMKEIAESFLGKEVKNAVITVPAYFNDSQRQATKDAGAITGLNV 173          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 3.189e-65
Identity = 122/155 (78.71%), Postives = 133/155 (85.81%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGVWQ+DRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMK WPFKV     DKP+I V Y+GEEK F  E+ISSMVL+KM+E AEAYLG  +K AVVTVPAYFNDSQRQATKDAG I+GL V
Sbjct:   16 SCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEKISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTISGLEV 170          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 4.166e-65
Identity = 122/155 (78.71%), Postives = 133/155 (85.81%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+ H +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F D +VQ DMK WPFKVI+    KP + V YKGE K F  EEISSMVL+KM+E AEA+LG T+K+AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   16 SCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNV 170          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 4.166e-65
Identity = 121/155 (78.06%), Postives = 134/155 (86.45%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGVWQ++R++IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D+ VQ DMK WPFKV     DKP+I V Y+GEEK F  EEISSMVL+KM+E AEAYLG  +K AVVTVPAYFNDSQRQATKDAG IAGL V
Sbjct:   16 SCVGVWQNERLDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEV 170          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 246.128 bits (627), Expect = 5.440e-65
Identity = 123/155 (79.35%), Postives = 134/155 (86.45%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DA VQ DMK WPF+V+    DKP + VNYKGE + F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   16 SCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVV-NDGDKPKVQVNYKGESRSFFPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 169          
The following BLAST results are available for this feature:
BLAST of CB322149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_HORSE2.442e-6580.65Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR2.442e-6580.65Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN2.442e-6580.65Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP74_TRYBB3.189e-6578.06Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP72_USTMA3.189e-6578.71Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_PYRSA3.189e-6578.06Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_LEIAM3.189e-6578.71Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP7A_CAEEL4.166e-6578.71Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP70_LEIMA4.166e-6578.06Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HS71B_MOUSE5.440e-6579.35Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0265 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB184 similar to HSP70 (acc# AAB88009), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322149 ID=CB322149; Name=CB322149; organism=Citrus sinensis; type=EST; length=469bp
ACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAAT
GACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGA
GCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGA
ACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
TGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAAGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTCA
TTGCTGGGCTTAATGTGAT
back to top