CB322149

Overview
NameCB322149
Unique NameCB322149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 9.603e-62
Identity = 120/155 (77.42%), Postives = 132/155 (85.16%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVG + ++RVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NT+FDAKRLIGRRF+D  VQ DMK WPFKVI     KP+I V +KGE K F  EEISSMVL+KMRE AEA+LG  + +AVVTVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:   14 SCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDG-KPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 9.603e-62
Identity = 117/155 (75.48%), Postives = 133/155 (85.81%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVG+++ DR+EIIANDQGNRTTPS+V FTDTERLIGD+AKNQVA+NP NTVFDAKRLIGR+F DA VQ DMK +PFKVI   A KP+  V +KGE K F  EEISSM+L KMRE AE+YLG T+ NAV+TVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:   14 SCVGIYRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDSAKNQVAINPHNTVFDAKRLIGRKFQDAEVQADMKHFPFKVIE-KAGKPVTQVEFKGETKDFTPEEISSMILTKMRETAESYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 1.638e-61
Identity = 119/155 (76.77%), Postives = 132/155 (85.16%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV++ DR EIIANDQGNRTTPS+V FTDTERL+GDAAKNQVAMNP NTVFDAKRLIGR+FSD  VQ DMK +PFKVI     KP+I V +KGE K F  EEIS+M+L KM+E AEAYLG T+ NAVVTVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:   14 SCVGVFREDRCEIIANDQGNRTTPSFVAFTDTERLVGDAAKNQVAMNPANTVFDAKRLIGRKFSDPEVQADMKHFPFKVI-DRGGKPVIQVEFKGETKVFTPEEISAMILQKMKETAEAYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 2.794e-61
Identity = 115/155 (74.19%), Postives = 134/155 (86.45%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+Q  RVEI+ANDQGNRTTPSYV FTDTERL+GDAAK+Q A+NP NTVFDAKRLIGR+F+DA+VQ DMK WPF+V++    KP + V+Y+GE+K F  EEISSMVL KM+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   18 SCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPLNTVFDAKRLIGRKFADATVQADMKHWPFQVVS-EGCKPKVRVSYRGEDKSFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNV 171          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 2.794e-61
Identity = 115/155 (74.19%), Postives = 133/155 (85.81%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+Q+ +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNPTNT+FDAKRLIGRRF+D+S+Q DMK WPF+VI     KPM+   Y GE K  + EE+SSMVL KM+E AEAYLG  + +AV+TVPAYFND+QRQATKDAGVIAG+NV
Sbjct:   16 SCVGVFQNGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFNDSSIQADMKHWPFRVI-NKDGKPMLQAEYMGETKTLSPEEVSSMVLTKMKETAEAYLGKKVTSAVITVPAYFNDAQRQATKDAGVIAGINV 169          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 2.794e-61
Identity = 117/155 (75.48%), Postives = 132/155 (85.16%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+Q+ +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP N+VFDAKRLIGRRF D+ +Q D+K WPFKVI     KP I V +KG  K F+ EEISSMVL KM+E AEAYLG T+K+AV+TVPAYFNDSQRQATKDAG IAG+NV
Sbjct:   13 SCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDAKRLIGRRFDDSKIQEDIKHWPFKVI-NDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINV 166          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 4.766e-61
Identity = 113/155 (72.90%), Postives = 134/155 (86.45%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+QH RVEI+ANDQGNRTTPSYV FTDTERL+GDAAK+Q A+NP NTVFDAKRLIGR+F+D +VQ D+K WPF+V++    KP + V+Y+GE+K F  EEISSMVL KM+E AEAYLG  +++AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   18 SCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQNTVFDAKRLIGRKFADPTVQSDLKHWPFQVVS-EGGKPKVRVSYRGEDKAFYPEEISSMVLSKMKETAEAYLGQPVRHAVITVPAYFNDSQRQATKDAGAIAGLNV 171          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 6.225e-61
Identity = 118/155 (76.13%), Postives = 127/155 (81.94%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTV DA RL GR+F D  VQ DMK WPF VI     +P + V YKGE K F  EEISSMVL KM+EIAEAYLG T+ NAV+TVPAY NDSQRQATKDAG I+GLNV
Sbjct:   16 SCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVLDANRLNGRQFDDGVVQSDMKHWPFNVI-NDNSRPKVQVEYKGESKSFYPEEISSMVLTKMKEIAEAYLGKTVSNAVITVPAYSNDSQRQATKDAGTISGLNV 169          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 8.130e-61
Identity = 115/155 (74.19%), Postives = 130/155 (83.87%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCV V++ + VEII NDQGNRTTPSYV FTDTERLIGDAAKNQ A NP NT+FDAKRLIGR+F D +VQ DMK WPFKV  GP  KP I V ++GE+K F AEEISSMVL KM+EIAEA+LG ++K+ V+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   15 SCVAVYKDNNVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQEARNPENTIFDAKRLIGRKFDDRTVQEDMKHWPFKVTNGPNGKPNIEVTFQGEKKTFHAEEISSMVLTKMKEIAEAFLGKSVKDVVITVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of CB322149 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 8.130e-61
Identity = 117/155 (75.48%), Postives = 130/155 (83.87%), Query Frame = 3
Query:    3 SCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 467
            SCVGV+QH +VEIIAN+QGNRTTPSYV FTDTERLIGDAAKNQVAMNP+NTVFDAKRLIGR+F+D SV  D K WPF VI     +P I V +KGE K F  EEISSMVL+KM EIA+AYLG  + + V+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   16 SCVGVFQHGKVEIIANEQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFNDPSVTSDRKHWPFNVI-DDGSRPKIQVEFKGETKSFYPEEISSMVLLKMEEIADAYLGKKVTDVVITVPAYFNDSQRQATKDAGVIAGLNV 169          
The following BLAST results are available for this feature:
BLAST of CB322149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_SCHPO9.603e-6277.42Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_CLAHE9.603e-6275.48Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_NEUCR1.638e-6176.77Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP76_SAGOE2.794e-6174.19Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP74_PARLI2.794e-6174.19Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP68_DROME2.794e-6175.48Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP76_PIG4.766e-6172.90Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP7C_DANRE6.225e-6176.13Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP70_THEPA8.130e-6174.19Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_HYDMA8.130e-6175.48Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]

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Properties
Property NameValue
Genbank descriptionEST0265 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB184 similar to HSP70 (acc# AAB88009), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322149 ID=CB322149; Name=CB322149; organism=Citrus sinensis; type=EST; length=469bp
ACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAAT
GACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGA
GCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGA
ACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
TGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAAGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTCA
TTGCTGGGCTTAATGTGAT
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