CB322151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.727e-18 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 FRPEFLNRLDE++VFR LTK ++++I +I L + RL K I L+ GY+P +GARPLRR I R LE +A+K+LA E+KE Sbjct: 740 FRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKE 831
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_MYCTU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.199e-16 Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 272 FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L G++P GARPLRR I R +ED ++EK+L E+ Sbjct: 705 FRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEV 794
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_MYCLE (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium leprae GN=clpC PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.199e-16 Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 272 FRPEFLNR+D++IVF QL++ E+ + D+M+ V ++LK KD+ L+ G++P GARPLRR I R +ED ++EK+L E+ Sbjct: 705 FRPEFLNRIDDIIVFHQLSRDEIIRMVDLMISRVANQLKVKDMTLELTNKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEV 794
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_MYCBO (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium bovis GN=clpC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.199e-16 Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 272 FRPEFLNR+D++IVF QLT+ E+ + D+M+ V +LK+KD+ L G++P GARPLRR I R +ED ++EK+L E+ Sbjct: 705 FRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEV 794
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_FUSNN (Chaperone protein clpB OS=Fusobacterium nucleatum subsp. nucleatum GN=clpB PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.489e-16 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 F+PEFLNR+DE+I F+ L +KEI + LK++ ++LK K I L+ Y+P YGARPLRR I R +E S+A+K+LA E+ E Sbjct: 748 FKPEFLNRIDEIITFKALDLPAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIETSLAKKILANEVHE 839
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.772e-16 Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 272 F+PEFLNR+D++I+FR L+ +K+I DI L++V +RL+ ++I L+ GY+P YGARPL+R I +LE +A+K++A EI Sbjct: 757 FKPEFLNRVDDIIMFRPLSSEGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETEIAKKIIAGEI 846
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: HSP78_CANAL (Heat shock protein 78, mitochondrial OS=Candida albicans GN=HSP78 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.015e-15 Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSG 344 + PEFLNR+D+++VF +L+K +KEI DI L+E+ DRL K I LQ GY+P+YGARPL R + + L D +A +++ +++E V N S G Sbjct: 682 YAPEFLNRIDDIVVFNRLSKTALKEILDIRLREIGDRLVDKRIILQLTDEAKTLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQVQENETVKVEVKDHKIYVVPNHSEG 795
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: ERD1_ARATH (ERD1 protein, chloroplastic OS=Arabidopsis thaliana GN=ERD1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.015e-15 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 275 FRPE LNR+DE+++FRQL K ++ EI ++ML+++ RL + L+ GY+P+YGARPLRR + ++ED ++E LA K Sbjct: 820 FRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFK 910
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.326e-15 Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 FRPEFLNR+DE IVF L K +K+I +M++++ RLK +D+ L G++P YGARPLRR+I + +ED ++E++L I++ Sbjct: 700 FRPEFLNRIDETIVFHSLEKEHMKDIVTLMVQQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIEK 791
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.261e-15 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 260 FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ +RL ++I + GY+P YGARPL RAI + +ED+++E +L Sbjct: 697 FRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELIL 782 The following BLAST results are available for this feature:
BLAST of CB322151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322151 ID=CB322151; Name=CB322151; organism=Citrus sinensis; type=EST; length=412bpback to top |