CB322151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNPX (Chaperone protein clpB 1 OS=Synechococcus sp. (strain WH8102) GN=clpB1 PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.953e-15 Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 FRPEFLNRLD+ I+FR L K E++ I + ++ + RL+ + ++LQ G++P YGARPL+RAI R LE +A+ +LA ++ E Sbjct: 755 FRPEFLNRLDDQIIFRSLEKEELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLKRAIQRELETPIAKAILAGQLSE 846
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.038e-15 Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 260 FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + GY+P YGARPL RAI + +ED+++E +L Sbjct: 697 FRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.038e-15 Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 260 FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + GY+P YGARPL RAI + +ED+++E +L Sbjct: 697 FRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_PHOPR (Chaperone protein clpB OS=Photobacterium profundum GN=clpB PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.038e-15 Identity = 37/91 (40.66%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 275 FRPEF+NR+DE +VF L + +K IA I ++ + +RLK KD EL G++P YGARPL+RAI + +E+ +A+++L+ +++ Sbjct: 749 FRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYELTVQESALDFVAKAGFDPVYGARPLKRAIQQYIENPLAQEILSGKLE 839
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_AQUAE (Chaperone protein clpB OS=Aquifex aeolicus GN=clpB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.038e-15 Identity = 36/91 (39.56%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 6 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 RPEF+NR+DE+IVF+ LT E+ +I D+++ V RL ++I+++ GY+P++GARPL+R I + +E +A+K++ EIK+ Sbjct: 878 RPEFINRIDEIIVFKPLTMRELSKIIDLLIANVNKRLAERNIKIELTEEAKKELVRRGYDPAFGARPLKRTIQKYVETPLADKIIRGEIKD 968
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.593e-15 Identity = 36/87 (41.38%), Postives = 62/87 (71.26%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLA 263 FRPEFLNR+DE+++F++LT+ ++ I DI L+ V +RL+++ I+L+ GY+ ++GARPL+RAI LE+++A ++L+ Sbjct: 767 FRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQTELENALAREILS 853
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.593e-15 Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 FRPEFLNR+DE+I+F +L + E+ I DI L+ + L + I L+ GY+P+YGARPL+RAI + ++D +AEK+L E + Sbjct: 751 FRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLSDRKITLELEDDARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEFPD 842
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-14 Identity = 36/90 (40.00%), Postives = 58/90 (64.44%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 272 FRPEF+NR+DE++VF L + + IA I LK ++ RL+ + E+ GY+P YGARPL+RAI + +E+ +A+++L+ E+ Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-14 Identity = 36/90 (40.00%), Postives = 58/90 (64.44%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 272 FRPEF+NR+DE++VF L + + IA I LK ++ RL+ + E+ GY+P YGARPL+RAI + +E+ +A+++L+ E+ Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-14 Identity = 36/90 (40.00%), Postives = 58/90 (64.44%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 272 FRPEF+NR+DE++VF L + + IA I LK ++ RL+ + E+ GY+P YGARPL+RAI + +E+ +A+++L+ E+ Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 The following BLAST results are available for this feature:
BLAST of CB322151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322151 ID=CB322151; Name=CB322151; organism=Citrus sinensis; type=EST; length=412bpback to top |