CB322166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.416e-17 Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPG--EAVVVNFPF 379 ++ CPY KFA+ +AN I EA + +H+IDF + QG QW L+ ALA RPGG P R+TGI Q + L VG +L++ A + V FEF+ A + +++ L ++P EAV +N F Sbjct: 273 YETCPYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNT--DALQQVGWKLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVF 398
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.238e-17 Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPGEAVVV 367 ++ CPY KFA+ +AN I EA +H+IDF + QG QW L+ ALA RPGG P R+TGI Q + L VG +L++ A + FEF+ A + ++E + L ++P E VV Sbjct: 245 YETCPYLKFAHFTANQAILEAFSMASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNT--DALQQVGWKLAQLAERIGIEFEFRGFVANSLADLEPEMLDIRPPEIEVV 364
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.207e-16 Identity = 49/128 (38.28%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPG--EAVVVNFPF 379 ++ CPY KFA+ +AN I EA + + +H+IDF ++QG QW L+ ALA RPGG P+ R+TGI + L VG +L+ A + +V FE++ A T +++ L ++P E+V VN F Sbjct: 244 YETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNF--DYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVF 369
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.576e-16 Identity = 49/128 (38.28%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPG--EAVVVNFPF 379 ++ CPY KFA+ +AN I EA E + +H+IDF + QG QW L+ ALA R GG P+ R+TGI + ++ L VG +L++ A + +V FE++ A + +++ L ++P EAV VN F Sbjct: 289 YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPVFRLTGIGPPAADNS--DHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSEIEAVAVNSVF 414
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.576e-16 Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPG--EAVVVNFPF 379 ++ CPY KFA+ +AN I EA E + +H+IDF + QG QW L+ ALA RP G P R+TGI ++ L VG +L +FA + +V FE++ A + +++ L ++P E+VVVN F Sbjct: 285 YESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALALRPSGPPTFRLTGIGPPAPDNS--DYLQDVGWKLVKFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVF 410
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.688e-16 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGI-----DDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPG--EAVVVNFPF 379 ++ CPY KFA+ +AN I EA E + +H+IDF + QG QW L+ ALA R GG P R+TGI D+S H VG +L++ A + +V FE++ A + +++ L ++P EAV VN F Sbjct: 296 YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHE-------VGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVF 421
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.511e-16 Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPGEA 358 ++ CPY KFA+ +AN I EA H +H++DF I QG QW LL ALA RPGG P R+TG+ Q L VG +L++FA + V F+++ A T ++E L+ + GEA Sbjct: 317 YESCPYLKFAHFTANQAILEAFAGCHRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDET--DALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPE-GEA 432
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.511e-16 Identity = 49/128 (38.28%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 5 FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQPG--EAVVVNFPF 379 ++ CPY KFA+ +AN I EA E + +H+IDF + QG QW L+ ALA R GG P R+TGI + ++ L VG +L++ A + +V FE++ A + +++ L ++P EAV VN F Sbjct: 283 YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPSFRLTGIGPPAADNS--DHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSETEAVAVNSVF 408
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.988e-16 Identity = 48/121 (39.67%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 14 CPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPL-VRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNF 373 CPY KFA+++AN I EA E + IHI+DF I QG QW LL ALA R G P +R++GI + L G RL +FA ++ F+F + RV P E + VNF Sbjct: 296 CPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNF 416
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.988e-16 Identity = 47/121 (38.84%), Postives = 60/121 (49.59%), Query Frame = 2 Query: 8 QICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVN 370 Q CP Y +AN I E +HIIDF I G QW L+ AL+KR G PL+R+TGI+ QS ++ G+RL F NVPFE+ A + L + GE VVN Sbjct: 290 QACPTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVN 410 The following BLAST results are available for this feature:
BLAST of CB322166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322166 ID=CB322166; Name=CB322166; organism=Citrus sinensis; type=EST; length=380bpback to top |